Zingiber officinale (ginger): 122014861
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Entry
122014861 CDS
T08725
Name
(RefSeq) testis-expressed protein 10-like isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122014861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122014861
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
122014861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
BP28CT
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
122014861
NCBI-ProteinID:
XP_042427276
LinkDB
All DBs
Position
8B:complement(23009859..23050075)
Genome browser
AA seq
878 aa
AA seq
DB search
MVRAKPASSKKQKRGVDFKKIRHKIGRKLPPPKNATNVQIKSKAIVLPQQSIASEKEGLA
VNKKGLTLRELLQQTSHHNAKIRRAALVGIKDLILKYPLELKLHKLAIIEKLRERICDND
KMVRDTLYHLLKNVIFPSSKEEITAPVISLLMAYIFNAMTHMTVDIRLMAFKFFELLAAN
YPSSFMSYAEKVLDNYIDILRNNQIYLVEKSKLINALAGLAHCLSLIANKGQCDDRLNNQ
NQEKFQRRVLHAYKLEVHEDHAGMDSLYVKLEELVPVLINCFLESTSTTRTMDVIDARSF
DCMLSTLHCTYLAVKFLGIEKLSTSVFDGRDVGQKNFNLYVKKLWETFPVGQLFQSAEKD
DDKYIILDIKIAQIFLCLTKWVNGIDFLSDKLVEFIEFLLLVGTNTRKKGAHMENHIVSL
LPFIPRLLSQITANGKARLLEAFTCSFKECRVDSRLFTAYLSVVEELLLVTINTGLQMHA
SSHQDHLSHEIAWVRELPRILLHLSDEHPSNTMVVLKVLLRIGQCSVPNSPLGFEYDALQ
FLLREFYAIRSHSGSINYGPFLKLPNDCKELALCCLCYFSRLTSDFLESLAYCCLCNDME
PLILLRIVEVLQIAYISGRVPVSEYMSFLVTLVARFRVSPERFLAKFFEEDSNRKTFKSI
TDAVFECLGQIGDSCIVLKLLFKNMLNEMLLKPPMDNFRGMLRMIIALDARLTKLSDEDI
GDLSKILCRYMVDTASSMSEDPGMACRFSGIPTFDFCLKPCIVLLIASGNVLPFVLKLLN
QFISEDCILLPYESDDKYGMDISSRINAVLHILSFMFSHKRLHINLSRNKAQIDHTLLIM
HNLLDSNKHNISYEERGRLQSGLDKMKGSICDLWIKNS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgggccaagccagcttcttccaagaaacaaaaacgtggagtggatttcaaaaaa
ataaggcataagattggacgaaagttgccaccgccaaagaatgctaccaatgtgcagatt
aaatctaaagccattgtgcttcctcagcagagtattgcatcagagaaagaagggcttgct
gtgaacaagaaaggcctgacactaagagagctccttcagcagacatcccatcacaatgct
aagataaggagagctgcacttgttggtataaaagacctcattctaaagtatccattggag
cttaaacttcacaagcttgccattatagagaagcttcgtgagcggatatgtgataatgac
aagatggtccgtgacacattatatcacctcttaaaaaatgtgatatttccttcatcaaaa
gaggaaataacagcacctgtaatctctttactaatggcttacatctttaatgcgatgaca
catatgacagttgacattaggctaatggctttcaaattttttgaactccttgccgcgaac
tatccatcttccttcatgtcgtatgctgaaaaggttcttgataattacatagatatcctc
agaaacaaccaaatatatctagttgagaagagcaagctcatcaatgctcttgctgggctt
gctcactgcctatctttgatagctaacaaaggtcaatgtgatgatagattgaacaatcag
aatcaggaaaaatttcagcgaagagttctacatgcctacaagctagaggtccatgaagat
catgctggaatggattctttgtacgtgaaacttgaagaacttgttccagtacttataaat
tgttttttggagtcaacttcaacaactcgcacaatggatgtaattgatgcccgatcattt
gattgcatgttgtctacacttcattgtacatacctggctgttaaatttcttgggatagag
aagctttccacttcagtgtttgatggacgtgatgttgggcagaaaaattttaatttatat
gttaaaaaactctgggaaacatttcctgtcggccagctttttcaatcagcagaaaaggat
gatgataaatatataattttggatatcaagatcgctcagatatttttgtgcctaactaaa
tgggtgaatggtattgattttctgagtgacaagcttgttgagttcatcgagtttttgttg
ttggttggcacaaatacacggaaaaaaggggcacatatggaaaaccacattgtttccctc
ttaccatttataccaagacttctttcacagattactgccaatgggaaggctaggcttctt
gaggcctttacttgttctttcaaggaatgcagggtcgattctaggctatttacagcatat
ttgtctgtagttgaagaattattgcttgttacgatcaatactggtctgcagatgcatgca
tctagtcatcaagatcatctaagccatgagattgcttgggtgagagagcttcccaggata
ttactgcacctatctgatgaacatccctctaacacgatggtggttttaaaagtcctactt
agaatcggacaatgttctgtgccaaattcacctcttggttttgagtatgatgctctgcaa
tttctcttgcgagaattttatgctattagatctcattcgggatcaataaattatggccct
tttctgaagctaccaaatgattgcaaggaacttgctctttgttgcttatgctacttttca
cggttgacttcagattttcttgaatcattagcctattgctgcttatgtaatgatatggaa
ccactcatactgctaaggattgttgaggttctgcagatagcatatatatctggtcgtgtc
cctgtttctgagtacatgagtttcttggtaactttagtcgcacgctttagagtatctcct
gaaaggtttcttgccaaattttttgaggaagattcaaatcggaaaacctttaagtccatt
acagatgcagtatttgaatgccttggtcagattggtgacagttgcattgtcctgaagttg
cttttcaagaacatgttaaatgagatgttactaaagcctcctatggacaatttccgtggt
atgctcagaatgatcattgcacttgatgccaggctaactaaactttcagatgaggatatt
ggtgacttaagcaaaatcctttgtcgatatatggttgatacagcatcatctatgtctgaa
gatcctggtatggcttgtcggttcagtgggatccctacatttgatttttgtctgaagccc
tgcattgtactgttgattgcgagcggcaacgtcttaccttttgtgttgaagttactcaat
cagttcatttcagaagattgtatattgcttccttatgaatctgatgataaatatggaatg
gatatctcaagtagaataaatgcagtgttacacatcctcagctttatgtttagtcataag
agacttcacataaatctttcaagaaataaagcacaaattgatcatactcttctgatcatg
cataacttattggattcaaataagcataacatttcatatgaagaaagaggcagattacag
agtggtcttgataaaatgaagggtagcatatgtgatctgtggataaaaaattcataa
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