Zingiber officinale (ginger): 122014938
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Entry
122014938 CDS
T08725
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122014938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122014938
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122014938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Mon2_C
Motif
Other DBs
NCBI-GeneID:
122014938
NCBI-ProteinID:
XP_042427418
LinkDB
All DBs
Position
8B:13282916..13288003
Genome browser
AA seq
1430 aa
AA seq
DB search
MGFVRLEINPIEEESYDVAGDGCKAPSFDDPSARADLACVICSEVSAVLAVMRRNVRWGG
RYASAADDHIIDHSLILSLKLLRRQVFSWGDVRRPWSTIDPSVYFRPFVDVVRSDETGAP
ITSVALSSLYKILTLDFLDPASGTAVGAAMHLVVDAVTSCRFEVTDPASEEAVLMKILQV
LLAIMRSRASTVLSNQHACTIVNTCFRVVHQATTKGELLQRLSRHTMLELVRCIFLHLAD
VHDGDASSSLNPKISAVDMEQAFGIAQVENGNGSIKVDDIGVGDEIGTGSEQKHDMKIIV
DPYGIPCMVEIFHFLCSLTNVQDQGGRNPATNQVAFDEDVPLFALSMINSAVELGGPSIS
KHPKLLTLIQDELFRNLIQFGLSMSPLILSTVCSIVLNLYRHLRSELKLQLEAFFSCVIL
RLTQSRYGASYQQQEVTMEALVDFCRQKNFMTEMYANFDCDITCCNMFEELANLLSKSAF
PINCPLSSMHVLALDGLIAVVEGMADRIGNASPSLEQSSLELQEYSPFWAVRCENYSAPE
YWVKFVRQRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPEKLDPQSVACFFRYTAGLD
KNLVGDFLGNHDEFCVQVLHEFAWTFDFQDMNLDTALRLFLETFRLPGESQKIQRVLEAF
SERYYEQSPQILVDKDAALVLAYSLIMLNTDQHNVQVKKKMTEEDFIRNNRRINGGNDLP
REFLTELYYSICRNEIRTVPEQGLGFTEMSPSRWIDLMQKSKKTSPYIVCNSLPYLDRDM
FAIMSGPTIAAISVVFDFAEHEEVLSTCVDGFLAVAKISAYHHLEDVLDDLVVSLCKFTT
LLNSSFVEETVTAFGDDIKARLATETVFSIANRYGDCIRTGWRNILDCILRLHKLGLLPA
RVASDAADDSELPLDSVPGKPVTSSLPISHIHSMSHPRRSSGLMGRFSQLLSLDTEEPRL
QPSEQQLAAHQRTLQTIQKCRIDSIFIKSKFLHADSLMQIAKALIWAAGRPQKVSSTPDD
EDTAVFCLELLIAITLNNRDRIGLLWQGVYEHIANIVQSTMIHCALVEKAVFGLLRICQR
LLPYKENLADELLTSLQLVLKLDARVADTYCENITQEVTRLVKANATHIKSQMGWRTIAS
LLSITARHPEASAVGFEAILFIMSEGAHLSPGNYVFCIEAARQFAESRVGVTDISVRALD
LMAESMNCLACWSNEIREAGADAEKVSEGIREMWLRLVQLLRKICLDQREEVRNHAVVSL
QRCFVGADGMCIPPPTWAQAFDLVIFDILDDLLECAQNQSQKEYRNMEGTLVQAVKLLSK
VFLQQLQDLFGLSSFCKLWLGVLSRLEKYKKVKVRSKKSDKLQELIPELLKNILIAMKSK
GILAKRSTIGGDSMWDLTWLHVNNIVPSLQAEVFPGEEMEQLHFCDQSDG
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgtgcgactcgagataaaccccatcgaggaggaatcatacgacgtcgccggg
gatggctgtaaggcgccatccttcgatgatccgtcagccagagccgaccttgcctgcgtg
atatgctcggaggtcagcgcagtactcgctgtgatgcgccgcaatgtgcggtggggcggc
cggtatgcttcagccgcggatgatcacatcattgaccactccctaatcctgtccctcaag
ttactccgccggcaggtcttctcatggggggacgtccgccgcccctggtccacgatcgac
ccttctgtttatttcaggccgttcgtggatgtggtccgctctgatgagaccggcgctcct
atcactagtgtggctctctcctctttgtacaagatccttactcttgacttcctcgacccg
gcgtctgggactgccgttggagctgcgatgcatttggttgtcgatgccgtcacgagctgc
cggtttgaggtgaccgaccctgcttctgaggaggccgttctgatgaagatactccaggtg
ctgcttgctatcatgcggagccgtgcctcgactgtgctgagcaaccagcatgcctgcaca
attgtaaatacctgtttccgcgtcgtccaccaggcaacaaccaaaggagagttgttgcag
agactttcaaggcacacgatgcttgagcttgtccgctgcatcttcttgcacttggctgat
gtccacgatggtgatgcatcttcttctttgaaccccaagataagtgcagttgatatggag
caggcttttgggattgctcaagtagaaaatgggaatgggagtatcaaggttgacgacata
ggcgtgggagatgaaattggtacgggatcagaacaaaaacatgacatgaaaatcattgta
gacccatatggaattccttgcatggtggagatattccacttcttatgttctcttacaaat
gtccaagaccaaggtggtaggaatcctgcaacgaatcaggtagcttttgatgaagatgtg
ccactatttgcccttagcatgatcaactcagctgttgagttgggaggaccttcaataagt
aaacacccaaaactattaaccctgatacaggatgaattgtttagaaacttgatacagttt
ggcttgtctatgagccctctaatactgtccacagtatgtagcatagttctgaatctttat
cgccacttgcgctcagagctcaaattacaactggaggcattcttttcttgtgtgatcttg
aggctcacacaaagtagatatggggctagctatcaacagcaggaagtaaccatggaggct
ctcgtggacttctgccgtcagaagaactttatgacagagatgtatgccaactttgattgc
gacattacttgctgcaatatgtttgaagagctagccaatcttctgtcaaaaagtgcattt
cctatcaactgccctctttcttccatgcatgttcttgctttggatggtttgattgcagtg
gtcgagggaatggctgataggattggaaatgcatctccctctcttgaacagtcttcgttg
gagcttcaggaatattcaccattttgggcagtgaggtgtgagaactactctgctccagaa
tattgggttaaatttgtccgacagagaaagtacattaaaaggagattaatgattggcgca
gatcacttcaacagagaccccaagaagggcttggagtttctgcaaggaactcatctgctg
cctgagaagcttgatccacagagcgtggcttgtttcttcagatacactgctggcttggat
aagaaccttgtcggtgacttcttgggaaatcatgatgagttttgtgtgcaagtacttcat
gaatttgcatggacttttgattttcaggacatgaatcttgatactgctctacgacttttc
ctagaaacattccggttgcctggtgaatctcagaaaattcagagagtacttgaggctttc
tcagagaggtattatgagcaatcacctcagatccttgttgacaaggatgcagcacttgtg
ttggcatactcacttataatgctcaatacagatcaacataatgtccaggtaaagaagaag
atgactgaagaggatttcatccgaaataatcgccgcattaatggtggtaatgacctccca
agggagttcctgacggagctctattactctatatgcaggaatgaaataagaactgtccct
gaacagggtttgggttttacggaaatgtcacctagccgatggattgatctcatgcagaag
tcaaagaagacatctccttacattgtttgcaattcccttccatatcttgatcgtgacatg
tttgcaatcatgtcaggtcctacaattgctgccatctcagtggtgtttgattttgcagaa
catgaagaagttctctcaacatgtgtagatggcttcttggctgtcgctaagatctcagca
tatcatcacctagaggatgtattggatgatttagttgtatccctatgcaaattcacaact
cttttgaactcatcatttgttgaggaaacagtgacagcctttggggatgacataaaagct
aggctggcaactgagacagtttttagcatagcaaatagatatggtgattgcatacgcact
ggctggagaaatatccttgattgtattttgcgattacacaaattgggtttgcttcctgct
cgtgttgcaagtgatgcagctgatgattcagaattgccgctagattctgtccctggaaaa
cctgtcacaagctctttgcccatttctcatattcatagtatgagtcaccctcggagatct
tctgggctaatggggagattcagccagttattatctctggacacagaagaaccaaggttg
caaccatctgaacagcaacttgctgcccatcaaagaactctgcagacaatacagaaatgt
cgcattgatagcatcttcataaaaagcaagtttttacatgctgattcgctgatgcaaatt
gccaaggcacttatctgggcagctggtcggccccagaaagttagtagtacccctgatgat
gaggacacagcagttttctgcttggagctgcttattgccatcacactaaacaaccgggat
agaattgggcttctttggcagggtgtctatgagcatatagctaacattgttcaatcgacc
atgattcattgtgcccttgtggaaaaggctgtttttggcctcctaagaatttgtcagcgg
ctactaccttacaaagagaatcttgctgatgagcttttaacgtcacttcaattggttttg
aagcttgatgctcgtgtggctgatacttattgtgagaatatcacacaagaagtcactaga
ctcgttaaagcaaatgcaacccatattaaatcacaaatgggttggcggaccatagcatcc
ctactctctatcactgctcgacacccagaagcttcagcagtaggcttcgaggcaattctt
ttcatcatgtctgaaggggctcatctatcgccaggcaactatgtcttttgcattgaagct
gcaagacagtttgcagaatctcgtgttggcgtaacagatatatcagttcgtgcattagat
ctaatggcagaatcaatgaattgtcttgcttgctggtctaatgagattagggaagcaggt
gcagatgctgagaaagtttctgagggaatcagagagatgtggctacgactggtgcaattg
ctgagaaagatttgtttggatcagagggaagaagtaaggaatcatgcagtggtatcactg
cagagatgttttgttggtgcagatgggatgtgtatcccacccccaacttgggcgcaggcc
ttcgatcttgttatatttgatattctcgatgacttgctggagtgtgcacagaatcaatca
cagaaagagtaccggaacatggagggtacacttgtgcaagcagtcaaattgttgtcgaag
gtcttcttgcagcaactgcaagatcttttcggcttgagtagcttctgcaagctttggttg
ggggtcctcagtcgtttggaaaagtacaagaaggtaaaagtgaggagcaagaagagtgac
aaacttcaagaattgattccagagcttctcaagaacattcttattgcgatgaaatccaag
ggaatccttgcaaaaagaagtacaataggtggggacagcatgtgggacttgacatggctt
cacgtaaacaatatcgttccatctttgcaggccgaagtgtttcccggcgaggagatggag
cagctacatttctgtgatcaatctgatggctag
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