Zingiber officinale (ginger): 122014939
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Entry
122014939 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit 4 homolog
KO
K03062
26S proteasome regulatory subunit T2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122014939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
122014939
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122014939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
DUF815
nSTAND3
AAA_5
AAA_16
AAA_lid_PRS2_C
AAA_2
RuvB_N
ATPase
TIP49
AAA_3
RNA_helicase
AAA_28
AAA_24
NPHP3_N
AAA_25
Sigma54_activat
TsaE
Mg_chelatase
IstB_IS21
DUF1128
NB-ARC
Parvo_NS1
NACHT
AAA_7
AAA_14
MCM
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122014939
NCBI-ProteinID:
XP_042427420
LinkDB
All DBs
Position
8B:complement(10342052..10349308)
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AA seq
445 aa
AA seq
DB search
MGQGTPGGMGKQGHPGDRKHDGDKKDKKFEPAAPPSRVGRKQRKQKGPDAAARIPTVTPL
SKCRLRLLKLDRIKDYLLMEEEFVANQERLRPQEEKNEEDRSKVDDLRGSPMSVGNLEEL
IDENHAIVSSSVGPEYYVSILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMK
VEKAPLESYADIGGLDSQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLL
AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRY
DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL
PDIKTRRRIFQIHTTRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLHALRERRMKVT
HADFKKAKDKVMFKKKEGVPEGLYM
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggggcagggaacccccggtgggatggggaagcaaggacaccctggcgatcgtaagcac
gatggtgataagaaggacaagaagttcgagccggcggcaccgccatctcgtgtcggccgc
aagcagcgcaagcagaaaggtcccgatgccgctgcacgaattcccaccgtcacccccctc
tcgaagtgccgcctccgccttcttaagctcgatcgcatcaaggactatctcctcatggag
gaggagttcgtcgctaaccaggagcgcctccgcccccaggaggagaagaacgaggaggac
cgatccaaggtagacgacctccggggttcgcccatgagcgtggggaatcttgaggagctt
attgatgaaaaccatgccatcgtctcctcgtccgtcgggccggagtactacgtcagcatc
ctttcctttgtcgataaggaccagctggaacctggttgtgccatcctcatgcacaataag
gtcctatcggttgttggccttcttcaggatgaagttgatcctatggtttctgttatgaaa
gttgagaaagcacctttggaatcatatgctgatataggtggcttagattctcaaattcaa
gaaattaaagaagctgttgaacttcctttgactcatccagagctgtacgaagatattggc
attaggccccctaagggtgtcatattatatggggagcctggaactggaaaaactttgctt
gccaaggctgtagctaactcaacatcagccactttcttgcgagttgttggcagtgagttg
attcaaaagtatttgggtgatggcccaaaacttgttcgagaattatttagagtagcagat
gaactttctccttcaatagtgtttattgatgagatagatgcagttggaaccaaaagatat
gatgctcattctggtggtgagcgcgaaatacagaggactatgttggagttgctgaaccag
ttagatggttttgactcaaggggtgatgttaaggttattcttgcaactaacagaattgaa
agtctggatccagccttgctccgtccaggtcggatagataggaagattgaattccctctg
ccagatattaaaacaaggcggcgaatttttcaaatacatactactagaatgacactggca
gatgatgtcaacctggaggaatttgtcatgacaaaggatgaattttctggagctgatatc
aaagcaatctgtactgaagctggtttgcatgctttgagagagcgtagaatgaaggttact
catgcagacttcaagaaggccaaagataaagtaatgtttaaaaagaaggaaggagtacca
gagggactctacatgtga
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