Zingiber officinale (ginger): 122014979
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Entry
122014979 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122014979 isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00270
Cysteine and methionine metabolism
zof01100
Metabolic pathways
zof04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122014979
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122014979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122014979
03032 DNA replication proteins [BR:
zof03032
]
122014979
03036 Chromosome and associated proteins [BR:
zof03036
]
122014979
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
122014979
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122014979
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
122014979
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122014979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
122014979
NCBI-ProteinID:
XP_042427494
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All DBs
Position
8B:complement(75430188..75437590)
Genome browser
AA seq
1124 aa
AA seq
DB search
MEVGSSQRPVDGEEAAADGHGFGRGYVGSKVFKELESVEFNEEVDGMLLDRTEAGFSGSS
KDAQGDEVNGPESTDFDDDSVSEEVVSDGARVFHRAVGNWMNGFELGDMVWGKVKSHPWW
PGYLFNEAFASLSVRRTRRDVHVLVAFFGDSSYGWFDPSELVPFDSHYEEKSKQTALRPF
VKAVEEATDEASRREALGLACYCRNKYNFGSARVPGYFDVDVPGFEPWGIYSSKQIEDAR
KNFVPDQSLSFLKQLALCPLEDIVPAIDRIKNTAKMLAYRCSVFEEFDETYAQAFGVEPV
RPPPLTGAMSDHPERFARRAAPLSGQLVMPEPRPKKSSAPKLASGPKVSKSPSAKKNKYV
LKRRDEQFSTTATIAGPPLPDFTSPTQPYGNFYNLFPTTQQPPTQPSLAFQDASVHGDYV
LQKRAPSIFIDDKLPQTSPNLLEQGLVISEQRSAPLGVDIPVAISPRKTPQMSVIEFRKL
DPAVSGIVADAKEEILLARPNDIIVVDGIPKVKKKIKKRLRVDGSSDPTDLARNAKKKIK
KKHKEQSTESGLLPDHARMAKDDDPYRKLASRLNSIGPEQSKRADAVARATSFPFSFQRP
KIDLNSRSQQLPELVADLHELALDPFYGIERDASGVALHVFLKFRSMVYQKSLALSLSSE
DDAVEVQAPKPPRSQQESVGGTAEIAPVKTAMEGKEPTASAKPPKAGFRSDDPVVAGRKR
TPSDREEDMSAKRQTKVNKVKALAIEKKSSISKKRNLKDAGSASTTTMPAVAAMHSVTAK
PSNAKTMEPVKKQEPPPPRVPCPTTLVMKFPPRTTLPSIASLKARFARFGPLELPDTRVY
WKSYTCKVVYKFKPDAEAALNYARANEIFGQVKVHFYLRDADTQSQEPSADAGGKKLESR
QAEGVQFRPGSNPTTSLRLLLNPNHKPGLLKSILKKPGDDAGPTTTISSSSRETPRVKFM
LDNLDGKPVMSPAVAGSSYSRSDAEPPPFSLPLESVINKTTKSGAFLPPPPLPLSALHSY
PSRTIDNSPYIPPPPVTPASSASFGLPPVNRVAMDRVPPPPPSSLRGPRSADPQTHNYRQ
YGEVEGRPMVNKELANQMLSLMVRCSDIVSSIKSSLGYVPYHPL
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggaggttggcagctcgcaacgaccggtagacggcgaggaggcagcggctgatggacat
ggttttggacgcggatatgttggatctaaggttttcaaggagctcgaatctgtggagttt
aacgaagaggttgatggtatgcttttggaccgtacggaggctggtttctctggatcttcc
aaggacgctcaaggagacgaagtgaacggtccagaaagtacggatttcgacgatgacagt
gtttctgaggaggttgtttcagatggagcgagggttttccatagggcagttggaaactgg
atgaatggttttgaactgggagacatggtgtgggggaaggtgaaatcacacccttggtgg
cctggttacttgttcaatgaggcttttgcttcgttatctgttagaagaacaagaagagat
gtccatgttttggtagccttctttggggatagcagctatggatggtttgacccttctgag
ctcgtcccatttgactcccactacgaggagaagtctaaacagacggccttgagaccattt
gtcaaggcagttgaagaggcaaccgatgaagcaagccgcagggaagctcttggccttgct
tgctactgtcggaataaatacaactttggttcagcacgtgtcccaggatatttcgatgtt
gatgtccctggattcgagccttggggcatttactcttcaaaacagattgaggatgctcgg
aaaaactttgtacctgatcaatctctctcctttttgaagcagttggccttgtgtccactt
gaagacattgttcctgctatagatcggattaagaacacggcgaagatgcttgcttacaga
tgttctgtcttcgaagagtttgacgagacatatgcccaagcatttggtgtagagccggta
cgaccacctcctttgactggggctatgtcagatcatcctgagagatttgcccgccgagcg
gcgcctttgagcggtcagctcgtgatgcctgagccccgcccaaagaaaagctccgcccct
aagctcgcttctggtcccaaagtgtccaaatctccatctgcgaagaagaacaaatacgtg
ctgaagcggagagatgaacaattctctaccactgctacgatcgccggccctcctttgccg
gacttcacctctcctacccagccctacggcaacttctacaatctcttccccacaactcag
caaccccccacccaaccaagtctcgccttccaggatgcctcggttcacggtgactacgtg
ctccagaagagagctccttccattttcatcgacgacaagctgccgcaaacctccccaaac
ctgctcgaacagggactagtcatctcagaacaaagatcggccccattgggggtggatatt
cccgttgctattagtcctcgaaagacgccgcagatgagcgtgattgagttcaggaaacta
gaccctgctgtctctggcatagttgccgatgctaaagaagagatcttgttggcccggccc
aatgacattattgtcgtcgatggaatcccaaaggtgaagaagaagatcaaaaaacgcctg
cgcgtggatggtagttccgacccaaccgatcttgccagaaatgccaagaagaagataaaa
aagaagcacaaggaacagagcaccgaatccggcttgctaccagatcatgctaggatggcg
aaagatgacgatccttataggaaattagcgtccagattaaatagcattgggccggagcaa
tccaagagagcggatgcagtcgcgcgagcgacctcctttcccttctcctttcaacgcccc
aagattgacttgaactcccgcagtcagcagctaccagagctggtagccgacctgcatgaa
ctagcactcgatcctttttacggaattgagcgcgacgcctcgggggttgcgctgcacgtc
ttcctcaagttccggtcgatggtctaccagaaaagcttggctctttctctctccagcgag
gatgacgccgtggaggtccaagctcccaaacctcctaggtcgcagcaggagtctgttggt
gggaccgcggagattgctccagtgaagacagctatggagggcaaggagccaactgcctct
gcgaagccaccaaaagccggatttaggtccgacgatcctgttgtggcaggacggaaacgc
actccatctgatcgagaagaggatatgagcgcaaagaggcagacaaaagtaaacaaagtc
aaggctttggccattgaaaagaaatcgtcgatcagtaagaagcgcaacctgaaggacgca
ggcagcgcctccacgacgacgatgcctgcagtagccgcaatgcatagtgtgacagcgaaa
cctagcaatgccaaaacaatggagcccgtcaagaagcaagaacctcccccgcctcgagtt
ccctgtccgactaccctcgtgatgaagttcccacctcggacgacgcttccatccatcgcc
tccttgaaagcgaggttcgcccgcttcgggccgctcgagctccccgacactcgcgtgtac
tggaaatcctacacctgcaaggtggtgtacaagttcaagcccgatgcagaggccgccctc
aactacgcccgcgccaacgaaattttcggccaggttaaggtacacttctatctccgcgac
gctgacacacagtcccaggaaccgtccgctgatgccggtgggaagaagctggagtcgcga
caagctgaaggtgtccaattccgacccgggagcaacccaaccacctcgttgaggctgttg
ctaaatccaaaccacaagccagggctgctcaaatccattctgaagaagcctggtgacgat
gctggccctaccaccaccatcagcagcagcagcagagagacgccccgtgtaaaattcatg
ttggacaatctggacgggaagccagtaatgtcgccggctgttgcaggaagcagctatagt
cgtagcgatgctgaaccaccccccttctcccttcctctagaatccgtcatcaataagact
acaaaatcaggtgcttttctccctccaccaccgctgccgctatcggcgcttcattcctat
ccttcaaggactattgataactccccttatatacccccaccgccggtgactccagcttca
tctgcttcgttcggactgcctccagtgaaccgggtggcgatggatcgtgtgccgccgccg
ccgccgtcttcccttcgtgggcctcgatccgctgatccccagacgcataattatagacag
tatggcgaggtggagggtagacccatggtgaacaaggagttggcgaaccaaatgctgagc
cttatggttaggtgcagcgacattgtgagcagtatcaaatcgtcgctagggtacgttcca
taccacccgctgtag
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