Zingiber officinale (ginger): 122014980
Help
Entry
122014980 CDS
T08725
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122014980
03036 Chromosome and associated proteins [BR:
zof03036
]
122014980
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122014980
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122014980
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122014980
microRNA pathway
RISC loading complex
122014980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122014980
NCBI-ProteinID:
XP_042427497
LinkDB
All DBs
Position
8B:complement(23656504..23666014)
Genome browser
AA seq
953 aa
AA seq
DB search
MLDDVEREKSCFLPSPAQYPTVAAMPTRQMPNQLKAEKHILSKKPLHNSVNQSKADVPPQ
ELKSAGRRRGRGKPAARQAKLETEAAVESTSPPVSSKGIAFCRRPGFGQEGTRCIVKANH
FLTELPDKDLNQYDVTITPEVSSRSTNRAIIAEMVRLYRETELGMRLPAYDGRKSLYTAG
SLPFHSKEFVINLVEDDEGTGLSRVKEYRVGIKFVARADLHHLRQFIAGRQTDAPREALQ
VLDIVLRELSNQRYISVGRCFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQMGLALNIDMS
STAFIDPLPVIEFVAQILGKDVSSRPLSDADRIKIKKALRGVKVEVTHRGNVRRKYRVSG
LTSQPTRELIFPVDDQMNMKSVVEYFKEMYGFTIQYAHLPCLQVGNQKKANYLPMEACKI
VEGQRYTKRLNEKQITSLLKVTCQRPRDQEMDILQTVRQNAYGNDPYAKEFGINISDKLT
SVEARVLPAPWLKYHDTGKEKECLPQVGQWNMMNKKVINGCTVNYWACINFSRSVQENTA
HSFCQELAQMCQVSGMEFNREPVIPIHSARPDQVGKALRHVYTAATNKLKGKELELLVAI
LPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLD
AISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQ
ELIQDLYKTWHDPQRGLVTGGMIRELLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYE
LDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFVNNHKDRSSTDKSGNILPGTVVDSKIC
HPAEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSIVP
PAYYAHLAAFRARFYMDPEVTESQPRSMHQTNGTPVKPLPALKEKVKRVMFYC
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgatgtagagagagaaaaatcttgcttcctcccttcgccggcgcaatatccc
acagtcgccgccatgcccactcggcagatgcccaaccaactcaaggccgagaagcacatc
ctgtccaagaagcccctccacaacagcgtgaaccagagtaaggccgacgtcccgccgcag
gagctcaagagcgccgggcgccgacgaggaagagggaagccagctgcccggcaagcaaag
cttgagacggaagctgcagtcgagagcacttctccccccgtttcgagcaaaggaatcgcc
ttttgccggcggccagggtttgggcaggagggcacccggtgcattgttaaggccaaccat
ttcctcactgagttgcctgataaggacttgaatcagtacgatgtgacgatcacgccggaa
gtgagttcccggagcacaaatagggctatcattgctgaaatggtgcggttgtatagggag
actgagttgggcatgaggcttcctgcttatgatggaaggaaaagcctttatacagctggg
agtttgcctttccactccaaggagttcgtcattaatcttgtggaggatgacgagggaacg
ggattatctagagtaaaggagtatagagttggcatcaagtttgttgcccgcgctgacctt
caccatctgagacaattcattgccggacggcagactgatgctcctagagaagcccttcaa
gttcttgatattgttctaagggaattatcgaatcaaaggtacatttctgttggaagatgc
ttttattccccagatatcagaaagccacaacgcctgggtgatggtttacagtcatggtgt
ggcttctaccaaagcattagaccaactcagatgggacttgcactcaatatcgatatgtca
tcgactgctttcatcgatcctcttcctgtgattgagtttgtagcccagatcctaggcaaa
gatgtatcgtctaggccattgtcagatgctgataggataaagatcaagaaagccctgaga
ggggttaaagttgaggtcacacacagaggaaatgtacggcgaaaatatcgagtttccggt
ttgacatcacaacctacaagggaacttatttttccagttgacgatcagatgaatatgaaa
tctgtcgttgaatacttcaaggagatgtatggatttaccattcagtatgctcatcttcct
tgcctccaagtagggaatcagaagaaagcaaattatcttccaatggaggcttgcaaaata
gtagagggtcaaagatacaccaagaggttgaatgaaaagcaaattacttcgttgctaaaa
gttacatgccaaagacccagagaccaagaaatggatattttacagacagttcgccaaaat
gcttatggaaatgatccttatgcaaaggaatttggaataaacataagtgacaagctaacc
tcggtggaggcccgagtactacctgcgccatggctgaagtaccacgacaccggcaaagaa
aaggagtgtctacctcaagttggtcagtggaacatgatgaataagaaggtgatcaatgga
tgtacagtaaactactgggcttgcattaatttttctcggagtgttcaggagaacactgct
catagtttctgtcaggagctagcacagatgtgccaagtatctggcatggaattcaaccgc
gaaccagttatcccaatacactccgcaagacctgaccaagttgggaaggccctaagacat
gtatatactgcagcaaccaacaaactaaaaggcaaagagcttgagcttctcgtagctatc
cttcctgataataatggttctttatacggtgatcttaaacgaatatgtgaaactgatttg
gggttgatctcacaatgctgtctgacaaagcatgtgttcaaaataagcaaacaatacctt
gcaaacgtctcgctcaaaattaatgtcaagatgggaggaagaaatactgtgcttctagac
gctataagttggcgaattcctttagtgagtgatataccaaccattatatttggagcagat
gtaacacatcctgagacaggagaagattcaagtccatctattgctgctgttgttgcctct
caagactggcctgaagtcacaaaatacgctggcttagtatgtgctcaggctcatcgacag
gaactgattcaggatctttacaagacatggcatgatccccagcgcggtttagttactgga
gggatgatcagggaacttctaatatctttccgcaaggcaacaggacaaaaacccttgaga
attatcttctacagggatggtgttagtgaaggacagttctatcaagtcttgttatatgaa
ctagatgctattcgcaaggcatgtgcatccttagaaccaaattaccagcctcctgtaacg
tttgtggtggttcagaaacgccatcatacgagactatttgtgaacaaccacaaggacaga
agcagcacagacaagagtggaaatatcctgccgggtaccgtggttgactccaagatctgt
catcctgctgagtttgatttctacctatgtagtcatgctggaatacagggtacaagtcgg
ccagcccattaccatgttctatgggatgagaacaatttcacagcagatgaaatgcagacc
ctcacaaacaatctctgctacacgtatgcccgttgcacccggtctgtatctatcgtgcca
cctgcctattatgcccacctagctgcttttcgagctcggttttacatggatccagaggta
actgaaagccaaccgcgaagcatgcaccagacaaatggaacccctgtgaagcccttacct
gccttaaaagagaaggtgaagagggtgatgttctactgttga
DBGET
integrated database retrieval system
