Zingiber officinale (ginger): 122015006
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Entry
122015006 CDS
T08725
Name
(RefSeq) importin subunit alpha-1a-like isoform X1
KO
K15042
importin subunit alpha-6/7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122015006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122015006
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122015006
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
IBB
Arm_3
HEAT_2
ARM_ARMC5
HEAT
ZER1-like_2nd
Arm_2
Adaptin_N
ARM_LRRK2
DUF4704
Motif
Other DBs
NCBI-GeneID:
122015006
NCBI-ProteinID:
XP_042427537
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Position
8B:complement(47654019..47659909)
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AA seq
531 aa
AA seq
DB search
MSLRPSERAEVRRNKYKVAVDAEEGRRRREDNMVEIRKNRREESLLKKRREGMQAVPPVP
QPIHTAAIEKKLESLPAMVAGVYSDDNAMQIEATTQFRKLLSIERSPPIEEVIQTGVVPR
FVEFLMREDFPQLQFEAAWALTNIASGTSEHTKIVIDHGAVPIFVKLLSSPNDDVREQAV
WALGNVAGDSPRCRDLVLGNGALFPLLQQLNELAKLSMLRNATWTLSNFCRGKPQPAFEQ
VKPALPALERLIHSTDEEVLTDACWALSYLSDGTNDKIQTVLEAGVCLRLVELLLHPSPS
VLIPALRTVGNIVTGDDVQTQYVINHQALPCLLNLLTHNHKKSIKKEACWTISNITAGNK
DQIQAVIVAGIIGPLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKYLVSQGCIKPLCD
LLICPDPRIVIVCLEGLENILKIGEAEKNSGSTGGVNLYAQMIDEAEGLEKIENLQSHDN
TEIYEKAVKILETYWLEEEDEAMPTGDAAAQAGFTFENDQNKVPPGPFNFS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacggccgagcgagagagcggaggtccgccggaacaagtacaaggtggccgtc
gatgccgaggagggacggcggcggagggaggacaacatggttgagatccggaagaaccgg
cgggaggagagcctcctgaagaaacggcgggaggggatgcaggctgtcccgcccgttccg
cagcccatccacaccgctgccatcgagaaaaagttggagagcctccctgcaatggtagcc
ggcgtttattctgatgacaacgctatgcagatagaagcaaccacgcagttccggaaatta
ctctctatagaacgaagccccccaattgaggaggtgatacaaactggggtagttcctcgg
tttgttgagttccttatgagggaagatttccctcaacttcagtttgaagctgcttgggcc
ctcaccaatattgcttcagggacatcagaacacactaagattgtgatagaccatggagct
gttcccatttttgttaaacttctcagttcccccaatgatgatgtccgtgaacaggctgtg
tgggccttgggtaatgtggctggtgattcaccaagatgtcgagatcttgtccttggtaat
ggagcattattcccgctcctgcaacagctgaatgagcttgctaaactctccatgttaaga
aatgccacttggaccctgtcaaacttctgtagagggaagccacagccagcttttgaacag
gttaagcctgctcttccagcacttgagaggttaattcattcaactgacgaagaagtactg
acagatgcatgttgggcactatcttatctgtcagatggtaccaatgacaaaatacaaact
gtccttgaggctggtgtctgccttcggcttgtagaacttcttctccatccctcaccttct
gtgcttattccagcccttcgtacagttggcaacattgtcacaggagacgatgtgcaaact
cagtatgttatcaatcaccaagcacttccttgccttctgaacctcctgactcacaatcat
aagaaaagcatcaagaaggaagcctgttggaccatctcaaacattacagctggaaacaag
gatcagatacaggctgttatagtggctgggattattggtccactggtgcatctattgcaa
actgctgaatttgacatcaagaaggaggctgcatgggcaatctccaatgctacttctggt
ggtactcatgatcagataaaatatttggttagtcagggctgtatcaaacccttgtgtgat
ctcctcatctgtccagacccaaggatagttattgtttgcttggagggacttgaaaatatc
ctgaaaattggtgaagctgagaagaattctggttctactggaggtgtgaacttgtatgct
cagatgattgatgaagcagagggtttggagaagattgaaaatcttcaaagccatgataat
actgaaatttatgagaaagcagtgaagattcttgaaacatattggttagaggaggaagat
gaagcaatgcctactggtgatgctgctgctcaagcaggatttacttttgaaaatgaccag
aacaaagttcctcctggtccattcaacttcagttaa
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