Zingiber officinale (ginger): 122015052
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Entry
122015052 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122015052
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122015052
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122015052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-C3H2C3
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
122015052
NCBI-ProteinID:
XP_042427632
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All DBs
Position
8B:complement(41308678..41317287)
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AA seq
255 aa
AA seq
DB search
MEDIHYINAGFPYTVTESFMDLFEGLTYAQADATFAEALHEQGNTYWSMYINPYKYGFSG
SSTGSYYDYSHTYEVNDYTQRLDEARRASENSAVSNNLNSAWPSRFGNEFSYANRNFGSE
ERVQVQQNGIGSQVFWQDNVDPDNMTYEELLELGEAIGTQSRGLTQEQIASLPVTKYKSR
LFSRKKARERCVVCQMKYKRGDRQTTLPCKHAYHSACVTKWLRINKACPICFVEVSIEEE
LNNQEFMPSGIHGSG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggaggatattcattatataaatgctggttttccttacactgtaacagaaagttttatg
gatttgtttgaagggctaacatatgcccaggctgatgctacctttgcggaagctttgcat
gaacaggggaatacttactggtctatgtacataaatccatataaatatggattttctggc
tcttctactggctcctattatgactatagccacacttatgaggtcaatgactatacacaa
agattggatgaggctagaagagcatcggagaactctgcagtttcaaacaacctcaattca
gcatggccatctcgatttggaaatgaattttcttatgcaaatagaaattttggatccgag
gaacgtgttcaagtacaacaaaatggaattggttctcaggttttttggcaagacaatgtt
gaccctgataatatgacatatgaggaattgctggagttgggtgaggcaattggaacacaa
agccgaggtctcactcaagaacaaattgcttcgcttcctgtcacgaagtataaaagtaga
ttattttctagaaagaaagcacgagagagatgtgttgtatgccagatgaaatacaagaga
ggtgatcgacaaacaacacttccatgcaagcatgcttaccattctgcctgtgtgacaaaa
tggcttcgtataaacaaggcatgcccaatttgctttgtcgaggtatctatcgaggaagaa
ctgaataaccaagaatttatgcctagcggaatacacggaagtggttag
DBGET
integrated database retrieval system
