KEGG   Zingiber officinale (ginger): 122015103
Entry
122015103         CDS       T08725                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122015103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122015103
   03041 Spliceosome [BR:zof03041]
    122015103
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122015103
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122015103
Spliceosome [BR:zof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122015103
SSDB
Motif
Pfam: RRM_1 RRM_7 Collagen
Other DBs
NCBI-GeneID: 122015103
NCBI-ProteinID: XP_042427724
LinkDB
Position
8B:complement(43891005..43897895)
AA seq 468 aa
MATKKRKIDQEDELLTGASDPLPPTVLYTPAPTSDEEDADGDDDEVGKLIELFSRDQLVA
LLRFAAASDAATLDEIRRTSDLDPSYRKLFIHGLDWNTTADALRSSFSRYGDIDDCRVIY
DKVNGRSKGYGFVLFRHRSSSRHALRRPQKLIDGRMTSCQLASAGSTTNFQNSAPNHLNS
NPGPSISFTTYQDNVARKIYVGNVHADVDGGRLLAFFSQYGEIEEGPIGFDRNTGRPKGY
ALFVYKTVEGAMRALEEPNKNFEGIILQCERANDRSKGAHHYNTAAPLNAAPNKGNLNGP
GYTMPVSDIGLAQQAALMGQGFLGMGGAQAYGQAMQSNAAVLALLAAAGQNPAAFGMTPS
ALTLNPAFATTFGAAGSQQTAPTLPQMAQVPNYGAASSVYQGTAGFQGATGFQGSPGFQG
PPGFQGPQGYQSSQSVAQQAAGGGSSYPTGTAPASRRPTGSMGGYGQV
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcgacgaagaagcggaagatcgaccaagaggatgagctcctcaccggcgcctccgat
ccccttcctccgaccgtcctctacacgcccgctcccacctccgacgaagaggacgccgac
ggggatgacgacgaggtgggtaagcttattgagctgttctccagggaccagctcgttgcg
ctcctccgcttcgccgccgcatccgatgccgctaccctggacgagatacgccgcacctct
gacctagatccctcctaccgcaagctcttcatccacggcctcgactggaacaccaccgcc
gatgccctccgctcctcgttctcccgctacggggacatcgatgattgccgcgtcatctac
gacaaggtcaacggccgatccaagggatatggctttgttctattccgccaccggagctcc
tcccgccatgccctccgccgcccacagaagctaatcgacggccgcatgacctcttgccaa
ctcgcatctgctggctccacaaccaatttccagaactcggcgccaaaccatctgaactct
aaccctggtcctagtattagttttaccacttatcaggataacgtagctagaaagatctat
gtaggaaatgttcatgccgatgtcgatggtggccgtctccttgcttttttctcccagtat
ggtgagatcgaggagggtcctattggttttgatcggaatactgggaggcctaaagggtat
gctttgtttgtctataaaacagtggagggcgcaatgagagcccttgaggagccaaacaag
aattttgagggtattattcttcaatgtgagagggctaacgacagaagtaagggggcacac
cattataacacagcagctccactcaatgcagcaccgaataaaggaaatctcaatggtcct
ggatatacaatgcctgtatcagatattgggttagcacaacaagctgcattgatggggcag
ggttttcttggcatgggcggggcacaagcatatgggcaggctatgcagtctaatgctgct
gtgcttgctttactggcagctgctgggcagaatccagctgcatttggaatgacaccttct
gctcttactttgaaccctgcctttgcaactacgtttggtgctgcagggagtcagcagact
gcacccactttgcctcagatggcacaggtgccaaactatggggctgcaagttctgtatat
cagggaactgctggtttccagggagctacaggttttcaaggttcgccagggtttcaagga
cctccagggtttcagggccctcaggggtatcagagcagtcagtctgttgctcaacaagca
gctggaggtggcagttcttaccctactgggacagctccagcatcaaggagaccgactgga
tcaatgggtggatatggacaagtttag

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