Zingiber officinale (ginger): 122015150
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Entry
122015150 CDS
T08725
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122015150
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122015150
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122015150
NCBI-ProteinID:
XP_042427823
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All DBs
Position
8B:49793355..49815751
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AA seq
758 aa
AA seq
DB search
MERSRSKRSYHHDLDAHSPSPPPRSKSRYDGGSGGHHRRGNHYRRSGDRRGPPPPPPLPP
PPPPPPALPSSSTLSPSPKLQDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQE
TGAWINVHQLVPGDDERIIETLDDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDG
NEDEAYGSGGAGWGGGDRDRGRITTRLVVPRTHVGCLLGRGGKIIEQMRMETNTHIRILP
RDQYTPRCVTVAEEVVQIVGEGNCVKKAVAIVLSRLKESLHRDRGPSRGRTYSPERYDEF
VSNTPHLSGAEESLLASRSSAGLDRSRNNSYALDHHGYSFDSDANHVNDQSQTLSFEELV
FRILCPNDKVERIIGLSSGIIEMLQADVGVNVQVSDPVPGSDECIITITSDEGSDADLFP
AQEALLHIQTKIVDLGPDKDNVITTRLLVPTCEIISLEGFDGLLSDIQRLTSANIQILPK
EDLPTCAMEADELVQIVGEIREARNALIQVTAKLRDYLYQDNSAPKSTLPLSFAAPSHAG
IIAGKECNSPAKASPHESYQGSDPQTEIQNMHVVIGTRHSKYDTGFPSVSDLKESNASDE
GRQSGVRRFNVPLVTKSTLEVTIPDQAVPSLIMRSGNKLAQISEMSGASITVIEDRPEQS
GKIVQISGSPEQAEKAQSLLMGFILSTLPLWYLQRWLCSFALPSCGCSPQMCRCSRYKGN
PRHLEMAHTCTEASQIWEVFKVIDGVLLLYIGVFLVFY
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggagcgatcgcgctccaagcggagctaccaccacgacctcgacgcccactccccgagc
cctccccctcgatccaagtcccgctacgacggcggcagcggaggacaccaccggcgcgga
aaccactaccggcggagcggtgatcgccgcggcccgcccccacctccgcctctaccaccg
ccgccgccgcccccgccagcactcccctcctcttccaccctctccccctcccccaagctc
caggacggcccccacagcgcggccactgtcaccaccttcttccgcatcctgtgccctgat
accaaggccggcggcgtcatcggcaagtacggcagcattatcaaggccttccggcaggag
accggcgcgtggatcaacgtccaccagctggtccctggtgacgacgagaggataattgag
acattggacgatcggaggaaggagctggatggtcgcccaccccagtactcaccagcggag
gacgctctgcggatgatccatgagcggatcgtggacgccgagtttgaattcggagatggc
aatgaggatgaagcatatggcagcggtggggcagggtggggaggtggggatagggatcga
ggaaggattacaacgaggctggttgtgccgagaactcatgtgggttgcttgttggggagg
ggagggaagataattgagcagatgaggatggaaaccaatacccacatccgaattttgcca
agggatcagtacactcctcgatgtgtcacagttgcagaggaggtagttcagattgttgga
gagggaaattgtgtgaaaaaagctgtagccatcgtattatctcgtttaaaggagagctta
catcgtgatcgtggtccttcccgtggacgaacatattcaccagagcgctatgatgaattt
gtaagtaatacaccacatctatcaggcgctgaagaatctcttttggcttcacgatcctca
gctggattagatcgatcaagaaataactcatatgctttggaccatcatggatactcattt
gattcagatgctaatcatgtgaatgaccaatcacaaacattatcctttgaggagcttgta
ttccgtattctttgtcccaatgataaagttgaaaggatcattggactttcaagtggaatt
attgaaatgttgcaagctgatgtgggtgtgaatgtgcaagtttctgatcctgtgccaggt
tcagatgaatgcattataactattacttctgatgagggatcagatgcggatctttttcca
gctcaggaggctttgttgcatatacagactaaaatagtagaccttggtcctgataaggat
aatgtcattacaacaaggcttcttgttccaacctgtgaaattatttcgctggagggattc
gatggattattgtcagatattcaaagattgaccagtgcaaacatacagatattacctaaa
gaagaccttcctacttgtgcaatggaggctgatgagcttgttcagattgtaggggagatt
agagaagctagaaatgctcttattcaggtgactgcaaagctacgtgattacctttaccag
gataattctgctccgaaaagtacacttccactgtcctttgctgccccgagccatgctggt
attattgctggaaaggaatgtaactctcctgctaaagcatcaccacatgaatcttatcaa
ggaagtgatccacagacagaaattcaaaatatgcatgtagtaattggcacacgacattca
aagtatgacaccggatttcctagtgtgtcagacctgaaagagagcaatgccagtgatgag
ggaaggcaaagtggtgtacgaagatttaatgttcccttggttactaagagcacattggaa
gttaccattccagaccaggcagtcccgagtttaattatgagatctggaaacaagcttgct
caaatcagtgagatgtctggagcatctattaccgtcattgaagacagaccagagcagtct
ggaaaaattgttcaaatatctggaagcccagagcaggctgagaaagcccagagccttctt
atgggctttatattgagcacactgcctctctggtaccttcaacgttggctatgcagcttt
gctttgccttcttgtggatgctcaccgcaaatgtgcagatgctcacggtacaaggggaac
ccaaggcacttggagatggcgcacacatgcacggaagcatcccagatttgggaggtgttt
aaggtgatagatggcgtgctgctgctttacattggtgtttttctggtattttactaa
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