Zingiber officinale (ginger): 122015216
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Entry
122015216 CDS
T08725
Name
(RefSeq) heat shock cognate 70 kDa protein 2-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
zof04141
Protein processing in endoplasmic reticulum
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122015216
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122015216
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122015216
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122015216
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122015216
03009 Ribosome biogenesis [BR:
zof03009
]
122015216
03110 Chaperones and folding catalysts [BR:
zof03110
]
122015216
04131 Membrane trafficking [BR:
zof04131
]
122015216
03051 Proteasome [BR:
zof03051
]
122015216
03029 Mitochondrial biogenesis [BR:
zof03029
]
122015216
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122015216
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
122015216
Spliceosome [BR:
zof03041
]
Complex B
Other components
Prp19 complex
122015216
Complex C
Prp19-CDC5 complex
122015216
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122015216
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP70 / DNAK
122015216
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
122015216
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
122015216
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122015216
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
122015216
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122015216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
DACNG
Motif
Other DBs
NCBI-GeneID:
122015216
NCBI-ProteinID:
XP_042427915
LinkDB
All DBs
Position
8B:complement(65926567..65930318)
Genome browser
AA seq
646 aa
AA seq
DB search
MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFTDASVQSDVKLWPFKVISGPGDKPMIVVNYKGEEKQFAA
EEISSMVLIKMKEIAEAYLGSVVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKSSSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDIVGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
KVESKNSLENYAYNMRNTIKDDKIASKLPAADKKKIEDAIEQAIQWLEANQLAEADEFDD
KMKELESICNPIIAKMYQGGDVPGGMDEDGPSAGASGAGPKIEEVD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaagggtgatggaccggctattgggatagatctcggcaccacctattcgtgc
gtcggtgtatggcagcacgatcgggtcgagatcatcgccaacgaccagggcaatcgcaca
acgccgtcttatgtcgcctttacagacaccgagcgcctcatcggtgacgccgccaagaac
caggtcgccatgaaccctatcaacaccgtgttcgatgcaaagcgtttgattgggaggcgc
ttcaccgatgcatccgtccaaagtgacgtcaagctctggccatttaaggttatttctggt
cctggtgacaagcctatgattgttgttaattacaagggggaggagaagcagtttgcagcc
gaagaaatatcttctatggtgttaatcaagatgaaagaaattgctgaagcctaccttgga
tctgttgtgaaaaatgctgttgtcactgtccctgcttacttcaatgactcccagcgtcag
gccacaaaggatgctggtgtcatttctggtttgaatgtgatgaggatcatcaatgagccc
actgctgctgctattgcctatggacttgacaagaagtcaagcagtgtgggtgagaagaat
gttctcatttttgatcttggtggtggcacttttgatgtctctctacttaccatcgaggag
ggtatctttgaggtcaaggccactgcaggggacactcatcttggaggtgaggattttgat
aaccgcatggttaaccattttgttcaagagttcaagaggaagaacaagaaggatatcgtt
gggaatcctagggcactgaggaggctgaggactgcatgcgagagggcaaagaggacactt
tcttccactgcacaaaccaccattgaaattgattccttatacgagggcattgatttctac
actaccatcacaagggccaggtttgaggagcttaacatggacctttttaggaaatgtatg
gagcccgttgagaagtgtctgagagatgctaagatggacaagagcacggtccatgatgtg
gttcttgttggtggatccaccagaatcccaaaggtgcagcagttgttgcaggactttttc
aatggcaaggagctctgcaagagtatcaatcctgatgaggctgttgcttatggtgctgct
gttcaggctgctattcttagtggtgagggcaatgagaaggtgcaggaccttctccttttg
gatgtcactccactttcccaaggtttggagactgctggaggtgttatgaccgtcttgatc
cccaggaataccaccatccccacaaagaaagagcaagtcttctctacctattcagacaat
caacctggagtcttgattcaggtatacgagggtgagagaaccaggaccagagacaacaac
ctgcttggaaaatttgaactctcaggaataccacctgctccccgtggtgtacctcagatc
acagtttgttttgacatcgatgctaatggtatcttgaatgtgtccgccgaggacaagaca
actggacagaagaacaagatcaccattaccaatgacaagggcaggctcagcaaggaggag
attgaaaagatggtgcaggaagcagagaagtacaagtccgaggacgaggagcacaagaaa
aaggtggaatcgaagaactccttggaaaactacgcctacaacatgagaaacactatcaag
gatgacaagattgcatccaagctgcctgcagcagacaagaagaagattgaagacgcgatt
gagcaggcgatccaatggctcgaagccaatcaactggcggaggctgatgaattcgatgac
aagatgaaggagttggagagcatctgcaaccccatcattgctaaaatgtaccagggcggt
gacgtgcctggtggaatggatgaggatgggccttcagctggtgccagtggtgcagggccg
aagattgaggaggttgattaa
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