Zingiber officinale (ginger): 122015248
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Entry
122015248 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122015248
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122015248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122015248
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
122015248
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Ortholog
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GFIT
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NCBI-GeneID:
122015248
NCBI-ProteinID:
XP_042427966
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Position
8B:66000412..66012059
Genome browser
AA seq
1157 aa
AA seq
DB search
MAILKNASRVLRATDDSSPRIASSQDEDAEPSAGIGKVESYVSEASYVDSGMETDECDQL
EVSEPGAQLCQVGNQNFGFPLELFDLPDLSSILSLETWNECLMEEERFVLAEYLPDMDQE
TFAITLKELFSGKNFQFGSPLDTFFSQLKGGLCDPKIIVYRHGLISMQRREHYHCLHRYQ
NSMVRSLVYMKDAFQNCADYSIQERIQFLNMVKRQRPLERNGDIRFETNSGEGNLHHLYS
RHSSKVARRFPKPSIDIKLREIGMGVEPVIFGKGKTKGVLKVTASKFPTQESFGTSAAHP
SALKYGMSSKSKAKIPKLPFSGKNKYTEYHLESPSRTIHYTSEDQDDMEEEYIIPPKELK
SGHRSIAASCLSRTGKNQKPVKRHSANMYSDEEEPADYSVFSHSRRKNGNVHHTVTIASY
VDESPEHTGEARSFEREFLPSTTDQTQSLMLNRPIRQNKVHEDSISLDYLLKSDDLNTRI
NKWNIKPEYEIEKKHKRMVGKDHSSQQSFYDADYSGDMMDEHMDNMDAISKLKGSNNRTN
RLENTMKFSDSQPDANFETSGLPLKGCNSSSKKPKWKVNGQYPDEPDDPRYLKPNAKQQK
GKRKAVAETDSLAAVNSDQAISKMDAEDVEPKPKLQKKPFALITPTIHTGFSFSIVHLLS
AVRKAMINQTEDSTFNDVHLHNRNYSPMQNIKELNDMCQTENSMHLAHSVENMVNQASLP
SLTFQEIVDRVRSNPGDPCILETQEPLQDLVRGALRVFSSKTAPLGAKGWKPLVCYEKLN
KSWSWTGPISSGLPDDENAEEETSSEAWGIPHKMLVKLVDAFANWLKSGQETLQQIGSLP
PPPTSLLSNLDEKERFKDLRAQKSLNTIGSSSNEVRAYFRREEFLRYSVPDRAFSYTAAD
GRKSIVAPLKRGGGKPTSKARDHFMLKPDRPPHVTILCLVRDAAARLPGSIGTRADVCTL
LRDSQYVVENVSDTQVTQVVSGALDRLHYELDPCVQFDSERKLWVYLHRDREEEDFEDDG
TSSTKKWKRQRKDTADPSDTGIANDVDTGTLAVCGPSTGLDHDHNLNVGTASVGSGDTAD
HLNEDMDVNVENFHPLMDINTISESNGNWNALGLNLLNENRLVCQKNSTDEDYKDETFCQ
ERPIQLNYDHIMNKKLY
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttgaagaatgcatctagggttttgagggcgaccgatgattcctcgccccgg
atcgcatcgagccaggacgaggacgcagagccctctgcggggatcggcaaggtggagtct
tatgtttcggaggcttcttatgtggactccggcatggagacggatgagtgtgatcagttg
gaagtcagtgagcccggagctcagttgtgtcaagtggggaaccagaactttggcttcccg
cttgagctcttcgatctccctgacttgagttcgattttatcgttggagacgtggaatgag
tgcctcatggaggaggagcggttcgtgctggcggagtaccttccggacatggaccaggag
acgtttgcgattaccctcaaagagctgttttctggaaaaaatttccaattcgggagcccg
ctcgatacttttttcagtcagttgaaaggtgggttatgtgaccctaagatcattgtttat
cgtcacggcttgatttccatgcaacggcgtgaacactaccattgcctgcacagatatcag
aattctatggtgaggagtcttgtctacatgaaggatgcatttcaaaattgtgctgattat
tctattcaagaaagaattcagtttctgaatatggtaaagagacagaggcctcttgagagg
aatggggatattaggtttgagacgaattcaggggaaggaaatttgcatcatctctactcg
aggcacagttctaaggtggctcgtcggtttccaaagccttcaattgatatcaagcttcgt
gagattggcatgggtgtggagcctgtgatatttggtaaagggaaaacaaaaggagtttta
aaggttactgcttccaagtttccaacacaggagagttttggaacatcagctgcacatcct
tcagctttgaagtatggaatgtcctcaaaatctaaagcgaaaattccaaagttgcctttc
agtgggaagaataaatatacagaatatcatctggaatctccttcaaggactatacattat
actagtgaagatcaagatgacatggaggaagagtatataattccaccaaaagagttgaaa
tcaggacacagaagtattgcagctagttgtctgtctagaacaggaaagaatcagaaacca
gtgaaaaggcacagtgccaacatgtatagtgatgaagaagagcctgcagactacagtgtt
ttcagtcattctcggaggaaaaatggaaatgtacatcatacagtaactattgcttcttat
gttgatgaatcacctgaacatacaggagaggctagaagttttgagagagaatttttacct
tctaccacagatcaaactcaaagtcttatgctgaatcgccccatcaggcaaaacaaggtc
catgaggactcaatttcactggattatctcctgaagtcggatgatttgaacaccagaatt
aataaatggaatatcaagcctgagtatgaaattgagaagaagcacaaaaggatggttggc
aaggatcattcttcacagcagtcattttatgatgctgattacagtggtgatatgatggat
gaacatatggataacatggatgcaatttcaaagttaaaaggcagcaataacagaactaat
agattggagaacaccatgaaattctccgattctcagccggatgctaattttgaaacatca
ggccttcccctaaaaggttgtaattcttcatcaaagaaacctaaatggaaggttaatggt
cagtaccccgatgagccagatgatccccgttatctgaagcccaatgcaaagcagcagaag
ggtaaaaggaaagcagttgctgaaactgactctctggctgcagtaaattcagatcaggca
atatctaaaatggatgcagaagatgtagaacctaagccaaaattacagaagaagccattc
gcccttatcacaccaactattcatactggtttctcgttttccatagtgcatctactttca
gctgtacgaaaggcaatgattaatcagacagaagattccacatttaatgatgttcatctt
cacaacagaaactatagccctatgcaaaatataaaagagctgaacgatatgtgccagaca
gaaaacagtatgcaccttgcccattctgttgagaatatggtaaaccaagctagtttgcct
tctcttacttttcaagagatcgttgatcgagtaagatcaaaccctggagatccatgcatc
cttgaaacacaggaaccacttcaagatttagtccgaggagctttaagggtattttcatct
aagacagcacctttaggagccaagggttggaagcccctagtatgctatgagaagttaaac
aaaagttggtcatggacaggccctatttcatctggtttacctgacgatgaaaatgcagaa
gaggagacttcttcagaagcatggggaattcctcacaagatgcttgtaaagcttgttgat
gcttttgctaattggctcaagagtggccaggagaccttgcagcagattgggagcctccct
ccacctcctacttctttgctttcaaacttggatgagaaggagaggtttaaagatctgaga
gcccaaaagagtctaaacactattggttcaagttcaaatgaggtaagagcatacttccgc
agagaggaatttttaaggtactcagttccagatagggccttttcctacactgctgctgat
ggaagaaaatcaattgttgctccattgaagagaggaggcggaaagccaacatcaaaggca
cgggatcatttcatgcttaaacctgatcggccacctcacgttactattctttgtcttgtt
cgagatgcagctgccaggttgcctggtagtattggaactagggcggatgtttgtactctg
ctgagggactcacaatatgttgttgaaaatgtttctgatacacaggtgactcaagtagtg
agtggggctctagatcgattgcattatgagcttgatccttgtgtacagtttgatagtgaa
agaaaattgtgggtttatctgcatagggatagggaagaggaagattttgaggacgatggc
acctcatcaactaagaaatggaaaaggcagaggaaagatactgcagatccatcagatact
ggaattgctaatgatgttgacactggaaccttggctgtttgcggcccttccactggcctg
gatcatgatcacaatctaaatgttggcacagcatcggttggatcaggagacacagctgat
catcttaatgaagatatggatgtaaatgtagagaacttccatcctctcatggacataaac
actattagtgagagcaatggtaattggaatgctctggggttgaatctattaaatgaaaac
agattggtatgtcaaaagaactccactgatgaggattacaaggatgaaacattttgtcaa
gagaggcccattcaactcaattacgaccacattatgaataaaaaattgtactag
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integrated database retrieval system
