Zingiber officinale (ginger): 122015256
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Entry
122015256 CDS
T08725
Name
(RefSeq) WD repeat-containing protein 11-like isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122015256
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zof03037
]
122015256
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Others
Others
122015256
Cilium and associated proteins [BR:
zof03037
]
Other cilia and associated proteins
Other cilium assembly proteins
122015256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
Beta-prop_WDR11_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
TPR_GEMI5
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
122015256
NCBI-ProteinID:
XP_042427976
LinkDB
All DBs
Position
8B:complement(2450001..2472326)
Genome browser
AA seq
1325 aa
AA seq
DB search
MASRSPRGARSHDAWDCLLPGPPSRSNGGAADCSNFGLLAYGAGSCVVVADPRSMQLVCI
LPMPPSAAASASAHASLAPFVTSVRWTPQPLLRDLSSHEDPFTSHLRLAAGDRQGRIAIW
DLRSRQVLLWLDLEASSSSSSGRMGIQDLCWVRSDSWLLAAIHGPSLLVLWDTVTGRCLW
KYDASPEYFSCIRRDPFDARHFCTLGLRGFLLSAIALSGGDGGSVSMQDHRITGISDSSS
DLQKLEKDSSGSASSLSPAHALFPLFFARLCFSPVSKSILLATFPKELIVFDLNYGTTLS
AIPLPRGFSKFMDLVPDQDRDLVYCAHVDGKLSIWKRKEGEQLHILCGMEELMPSIGTSV
PTPAVLALTLRQSESSVQNIGRVFTNPSDIQTSLVEDPSNSQASLAEDDTLSKILNKEID
AALKTCLISISDDGKIWNWLLTSERDVSDSTKEQVSGNGTNSPSITLKLTEPVSMKISLM
GQLHLLSSTLTTLAVPSPSLTATLARGGNNPAPAVPLIALGTQGGTIDVVDISASAVAVS
FSVHNNPIRGLRWLGNSRLVSFSYGQVNDKGGGFTNRLVVTCLRSGLNRPFRLLQKPERA
PIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPSAPRPIQSGP
SRESLASKEQISTPNTSANTSSTEAKVANSDSTVDDTSESFAFALVNGALGVFEVHGRRI
RDFRPKWPSTSFASSDGLITAMAYRLPHVVMGDRLGNIRWWDVTTGLSSSFNTHREGIRR
IKFSPVVPGDRSRGRIAVLFYDNTFSIFDLDSSDPLANALLQPQSPGTLVLELDWLTRRT
DRNEPLVLCIAGADSSLRLIEVNISDTKTGSITKSRVLNERFRPVPLCVPMLFPTAHALA
LRTILQLGVKPSWFILNNATSGILPYQIPDLVPASPSDLRSFMIESTLPSVGDIVVPELL
LKVLEPYRREGCILDEERVGLYASLVNKGSAARFAFAAAIFGELSEALFWLQLPHALSHL
LERSENKSQHSSKPASISEAESALLNRIASRERSAGSITSEAVKYGQLNMMAFSQEELWG
KANEQIAWHAKLDGEEAIQKRVHELISVGDLEAAVALLLSTPPEGSQFYPNALRAVALSS
AVSRSLHELAVKVVAANMVRTDNSLSGIHLLCAVGRYQEACSQLQDAGCWTDAATLAATH
LRGSDYSRVLQRWAGYVLHSEHNIWRALILYVAAGALVEAFAALRDARQPDTAAMFLLAC
HEIYSQASPNSQTDVETSITVDEKQSFQLPLRNLVDEDIKAISEFYGEYQRKLVHLCMDA
TPTFD
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaggtcgccgaggggagcgcgatcacacgacgcctgggattgcttactacca
ggcccgcccagccgcagcaacggcggcgccgccgactgcagcaatttcggcctcctcgcc
tacggtgccggaagctgcgtcgtcgtcgcagaccctcgatccatgcagctcgtctgcatt
ctgcctatgcctccctctgccgccgcctccgcctccgcccacgcctccctcgccccattc
gtcacctccgttcgatggaccccccagcctctcctccgcgacctatcctctcacgaagac
cctttcacctcccacctccgcctagccgctggcgatcgacagggccgcatcgccatatgg
gacctccgatcccgccaggtcctactctggctcgacctcgaggcatcgtcttcctcttcc
tccggccggatgggaatccaggatctttgctgggtccgctccgactcctggcttctggcc
gcgatccatggtccgtcgcttctcgtcctttgggacaccgtcaccggccgctgtctgtgg
aagtacgatgcctctcctgagtatttctcctgcattcgccgcgatccctttgacgcaagg
cacttctgcacccttggcctccggggcttccttctctcggccattgccttgagtggcggg
gacggtggttccgtctctatgcaagatcatcggatcactgggatttctgattcatcctcc
gatctgcaaaagctcgagaaggactcctctggatctgcttcttcattgtctccagctcac
gccctcttccctcttttctttgcaaggctttgcttctcgcccgtatcgaagtccatcctc
cttgcgaccttccccaaggagcttattgtttttgacctgaattatgggacgacactgtcg
gccattccactgcctcgtggattcagcaagtttatggacttggtgccagatcaagatcgc
gatctggtttactgtgcacatgttgacgggaagctcagtatctggaagaggaaagaagga
gagcaattgcatatactctgtggaatggaagaattaatgccctccattggcacatctgtc
ccaactccagccgttctcgcactcactcttcgccaatcagaatcttcagttcaaaacatt
ggccgtgtcttcaccaatccatcagacatacaaacttcacttgtcgaagatccatcaaac
tcacaagcctcacttgctgaagatgacaccctttctaaaattttaaataaggaaattgat
gctgctctgaagacatgtttaatctcgatttctgatgatgggaaaatctggaactggctt
cttacttctgaaagggatgtatcagattctactaaagaacaagtttctggcaatggaacc
aattctccatctataaccctgaaactcactgaaccagtgtctatgaagatcagtttgatg
ggtcagctccatcttctttcttcaacattgaccactctagctgtaccatccccatcattg
acagccactttagctcgtggaggaaataatcctgccccagccgttccactcattgctttg
gggacacaaggtgggactattgatgttgttgatatttctgctagtgcagttgcagtgagc
ttttctgtccataataatcctatcagaggactgcgatggcttggaaattcaaggcttgtt
tccttctcatatggtcaggtaaatgacaaaggaggaggcttcactaatagacttgttgtc
acttgcctaagaagtgggcttaatcgcccatttaggctccttcaaaagccagagcgcgcc
cccataagagcattaagagcctcttcatctggaaggtatctcctcattttgtttcgggat
gctccagttgaggtatgggctatgacaaagacacccattatgcttagatcattagctctt
ccatttactgtgttggaatggacattaccaagtgcaccccgccctattcagagtggccct
tctcgggagtccttggcatcaaaagaacagatatctactccaaatacaagtgcaaataca
tcgtctactgaagctaaggtggcaaactcagactctactgtggatgacacatcagagagt
tttgcatttgccttagtgaatggtgcccttggtgtgtttgaggtccatggccggaggatt
agagattttagaccaaagtggccatcaacctcatttgcttcatcagatggtctaatcact
gctatggcatatcgtctcccgcatgtggttatgggggatcgattaggtaacatacgctgg
tgggatgtgactactggtctttcttcttcatttaacacccacagagaaggaattagaagg
attaagttttctcctgttgttcctggagatcggagcagagggcgtattgctgtactcttt
tatgacaatacattctcaatatttgatcttgactcgtcagatccattggccaatgccctt
ttacagcctcaatctcctggaacgcttgttttggagcttgattggctgacaaggcgaaca
gacagaaatgaaccactggttttatgcatagctggagctgacagtagtcttcgccttatt
gaggttaatataagtgacacaaagactggttcaatcacaaagtccagagtgttaaatgag
agatttcgaccagtacctttgtgcgtacctatgttatttccaacagcacatgcactggca
ttacggacaatcttgcagcttggcgtgaaaccttcttggttcattttgaacaatgcaacc
tcaggtattcttccatatcagattcctgatctggtcccagcatctccaagtgacctgcga
agctttatgatcgagtcaactcttccctctgtgggtgatattgttgtgcccgaattactt
cttaaggttctagagccatatcgaagagagggatgcattcttgatgaggaaagggttggg
ttatatgcttcattagtcaacaaaggttctgcagcaaggtttgcctttgctgctgctatt
tttggtgaactttcggaagcgctgttctggttacagctaccacatgccctcagtcatttg
ctggaaagatctgaaaataaatcacagcatagctccaagcctgcatcaatttctgaggct
gaaagtgctcttcttaatcggatagcatcacgtgaaaggtctgcaggctcaataacatca
gaagcagtgaagtatggacagctaaatatgatggctttcagccaagaggaattgtgggga
aaagcaaatgagcaaattgcttggcatgcaaaactagatggagaagaggcaattcaaaag
cgtgttcatgaacttatctctgttggagacttggaagcagctgtagctttgctactctcg
acgccaccagagggatctcagttttatccaaatgctttacgagcagtggcattgtcttct
gctgtgtcacggtctttgcatgagcttgctgtaaaggttgttgcagcaaatatggtaagg
acagataactcactgtcaggaatccatcttctctgtgctgttggaagatatcaagaagca
tgttctcagttacaagatgctggatgttggacagatgctgctactttagccgcaactcat
ctacgtggatctgactattcaagggtcttgcaaagatgggctggttatgttttgcatagt
gaacataacatttggagagccctgattttgtatgttgctgctggagctctcgtggaggcc
tttgcagctctacgtgatgctcggcaaccagatacagctgcaatgttcttgcttgcatgc
catgagatctattcacaagcatcaccaaatagtcaaactgatgttgaaacatcgataact
gtggacgagaaacaaagttttcaattgcctctaaggaatttggtagatgaggatatcaaa
gcaattagtgagttctatggagaataccaaagaaagttggtgcacctttgcatggacgca
acaccaacgtttgattga
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