Zingiber officinale (ginger): 122015279
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Entry
122015279 CDS
T08725
Name
(RefSeq) actin cytoskeleton-regulatory complex protein pan1-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122015279
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122015279
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
POL2_thumb
VMAP-M1
Motif
Other DBs
NCBI-GeneID:
122015279
NCBI-ProteinID:
XP_042428013
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Position
8B:complement(42291139..42307492)
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AA seq
578 aa
AA seq
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MSEVFNNQMLVEKLSKLNNSQQSIQTLSNWCVIHRKKAKIIVETWDEAFNNSPNEKRVPF
LYLANDILQNSRRQGSEFVNEFWKVLPGCLKNVYENGEDHGKKVVNRLALCSCTKVHNYL
CIHVPWKSQVEIWDDRKVFGSRGRGLKDEILGTVPVPVSNNGKSNSNPIKLIRKDANSVR
VKLAVGEMPEKIVTAYQSVLDEHSSEDTALSKCKDAVQVLEKMEKGIDVAGKQGHQLAPA
FMSELQNQETVLKQCIEQLEAAKSTRAMLVYQLTEALKEQEFKLDFINDQLQIAHSLNDH
AGSMRQRLLGFGVGASGSTSMAQPANISSEAKPLTESNLLISIPQLLPPNSVTSFAGSIS
SAEDDHKKAAAAVAAKLTASSSSAQVLSSILSSLAAEEAASIGNSLNSQVLSDGQASFPL
EKKPRLEKLITMPDMGKTSYFGQMQLQQHQSIPFAAPQTSSANIQLSQSNQAPPTFAPPL
PPLPPLPPPPLQQFAQTSGVTNIGPYAFAAGSLPPPPLSHLPLGFTRPSIPPVPPPPPPP
PSQQQQQQQLQSTSMGFYQSPGVGFYGQPQTAPTAQPQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggttttcaacaaccagatgttagttgagaagctttcaaagctcaacaattca
caacaaagtattcaaaccttgtcaaattggtgtgttattcaccgaaagaaagcaaaaatt
atagttgaaacatgggatgaagctttcaacaattctccaaatgaaaaaagagtgcctttt
ctatacttggccaatgacatcttacaaaatagtagacgccagggaagtgaatttgtgaat
gaattttggaaagtacttcccggatgtttaaagaatgtctatgagaatggtgaagatcat
ggaaagaaagtggttaatcgattggccttgtgctcgtgcactaaagtgcataactatttg
tgcatacatgtgccgtggaagtctcaggtcgagatttgggatgatagaaaagtatttggc
tctcgtgggcgaggcctaaaggatgagatccttggtactgttcctgttcctgtttcaaac
aatggcaagagcaattcaaatcccatcaaattaattcgtaaggatgctaattcagtgcga
gtaaaactggctgttggagaaatgcctgaaaagatagtgactgcatatcagtctgtgctt
gatgaacattccagcgaagatactgctttaagcaaatgtaaggatgctgttcaagttctg
gagaagatggaaaagggcattgatgttgcaggtaaacaaggtcaccaactagcaccagca
tttatgagtgagcttcagaaccaggaaacggtacttaaacaatgtattgaacagctagaa
gctgcaaaatcaactagagctatgctggtttatcagttgacagaagctctaaaagagcag
gaatttaagctggatttcatcaatgatcagttacaaattgcccattccctcaatgatcac
gccggtagcatgcgacaacgactactaggctttggtgttggggcaagcggctctacctct
atggcacaaccggcaaatatttcatcagaagcaaagcccctgacagaatcaaacctgctg
atatccatccctcaacttttaccaccaaattcggtaacttcatttgccggcagcataagc
agtgcagaagatgatcacaagaaggcagctgctgcagttgctgcaaagctgactgcatca
tcatcgtcggcacaagttctgtcttctattctgtcatctttggctgcagaagaagctgct
tccataggcaacagcttgaattcccaagtcctctctgatggccaagcttctttccctttg
gagaaaaagcccagacttgagaagctgataaccatgcccgatatgggcaaaacctcctat
tttggccagatgcagctgcaacaacatcagtcaattccatttgcagctccccaaacctca
tccgctaacatacaactgtcccagagtaatcaggcacctccgacttttgcaccgccactg
ccacctctaccgccactgccaccgccgccgctgcagcagtttgcacaaacaagtggagta
acaaacataggaccttatgcatttgcagccggttcactgccccctccaccgctatcccat
ctgccactggggttcacgagacccagtatcccacctgtacctccaccaccaccacctcca
ccatcgcagcagcagcagcagcaacagttgcagtcaacctcaatgggcttctaccaatct
cctggcgtcgggttctacggccagccgcagacggctccaactgcccagccacagtga
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