Zingiber officinale (ginger): 122015353
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Entry
122015353 CDS
T08725
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122015353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122015353
03032 DNA replication proteins [BR:
zof03032
]
122015353
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
122015353
Prokaryotic type
122015353
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
122015353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
122015353
NCBI-ProteinID:
XP_042428135
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Position
8B:complement(19001271..19003378)
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AA seq
617 aa
AA seq
DB search
MSSTVAEIPSPSAVDTEKKKKKKKSKDDKKTAADDDVLPHLPSAAEGVDDKDFFIKPQSF
TPSVDTSSWPILLKNYDRLNVRTGHYTPLPAGHSPLKRPLAEYLRYGILNLDKPSNPSSH
EVVAWIKRILRSEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDV
PDVAKVARALETLTGAVFQRPPLISAVKRELRIRTIYDSKLLEYDPERHLVVFWISCQAG
TYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWMYDNFKDESYLR
RVVMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAI
ALGIAEMTTAVMATCDHGSVAKIKRVVMDRDTYPRKWGLGPRALQKKKMIAEGLLDKHGK
PNEKTPAEWQRNVVLPAGEDSMVASLAAAPEPEVQKEEEIIEVKKHKKKHKDKDNEGDNE
TEGRKRKLEDTAEEPAAKKLKVEEVEEGVVGDEVKKLKKVKVEEVEDAKVEANVEEELNE
KSVKKKKKKEKSSKNISEVDSSDEEKSTEKKKKKKKKHSGGEEAELAASLTENTDAEKSQ
KKEKKKKKNRDAELIEA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacggtggctgagatcccctcgccatcggcggtcgatactgagaagaagaag
aagaaaaagaagagcaaggacgacaagaaaaccgccgccgatgatgacgtccttcctcac
ctcccttccgccgccgaaggcgttgatgacaaggactttttcatcaagccccaatctttc
accccttccgtcgacacttcctcatggccgatcctccttaagaattacgaccgactcaac
gtccgcaccggccactacacgccgctcccagctgggcattcccccctcaagaggcccctt
gcggagtacctccgttacggcatcctcaacctcgacaagccctccaacccctcctctcac
gaggtcgttgcctggatcaagcgcatcctccgctccgagaagaccggccatagcggtacc
ctcgatcccaaagtcaccggaaatcttattgtctgcatcgatcgtgccactcgtctcgtc
aagtctcagcagggcgccgggaaagagtacgtctgcgtcgcccgactccactccgatgtc
cccgacgtcgccaaggtcgcccgcgccctggagacccttaccggtgcagtcttccagagg
ccccctctcatttctgctgtcaagcgcgagctccgcatcaggactatctacgacagtaag
ctgctcgagtatgatcccgagcgccacctcgtcgtcttctggatctcttgtcaggctggc
acctacgtccgtaccctctgcgtccatctcgggctgattcttggcgtgggagggcatatg
caagagctgcggcgtgtccgttcagggatcctcggcgagaaggacaacatggtgaccatg
cacgatgtgatggacgcccagtggatgtatgataacttcaaggatgagagctacttgagg
cgggtggtgatgccgttggaggtggttcttactagctacaagaggctggtcgtcaaggac
tctgcagttaatgctatttgctatggcgcgaagctgatgattccggggcttctgagattt
gagaatgatattgaagtcggcgaggaaatcgtgttgatgaccacaaaaggggaagcgatc
gctctgggaattgctgagatgactactgctgttatggcaacatgcgaccatggatcggtt
gctaaaattaagagggtggtgatggacagggatacttatcccagaaaatgggggttgggg
ccgagagctctgcagaagaagaagatgattgctgaggggctcctggataagcacgggaag
cccaatgagaagactccagctgagtggcaaaggaatgtggtgctgccagccggtgaggat
tcaatggtcgccagcctcgccgccgcaccggagcctgaggtgcagaaggaagaagaaatt
atagaagtgaagaaacataagaagaaacacaaagacaaggataatgagggtgataatgaa
acggaaggaaggaaacgcaagttggaggatactgccgaagaaccagctgcgaagaagctg
aaggttgaggaggtagaagagggtgtcgttggtgacgaagtaaagaagctgaagaaagtg
aaagttgaggaggttgaagatgctaaagtggaggccaatgttgaggaagaactgaatgag
aagagtgtaaaaaagaaaaagaagaaggaaaagagcagtaaaaatataagtgaagtcgat
tcttcagatgaagagaaatcaactgagaagaagaaaaagaaaaagaagaagcactcaggt
ggtgaagaggctgaactcgcagccagcttgacagagaacactgatgcagagaaaagccag
aagaaggagaagaagaagaaaaagaaccgtgatgctgagttaatagaagcctga
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