KEGG   Zingiber officinale (ginger): 122015356
Entry
122015356         CDS       T08725                                 
Name
(RefSeq) rac-like GTP-binding protein RHO1 isoform X1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04145  Phagosome
zof04148  Efferocytosis
zof04620  Toll-like receptor signaling pathway
zof05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:zof00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    122015356
   04148 Efferocytosis
    122015356
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    122015356
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    122015356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122015356
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    122015356
   04031 GTP-binding proteins [BR:zof04031]
    122015356
Membrane trafficking [BR:zof04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    122015356
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    122015356
  Macropinocytosis
   Ras GTPases
    122015356
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    122015356
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122015356
  Exosomal proteins of other body fluids (saliva and urine)
   122015356
  Exosomal proteins of colorectal cancer cells
   122015356
  Exosomal proteins of bladder cancer cells
   122015356
GTP-binding proteins [BR:zof04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    122015356
SSDB
Motif
Pfam: Ras Roc Arf
Other DBs
NCBI-GeneID: 122015356
NCBI-ProteinID: XP_042428141
LinkDB
Position
8B:56613342..56615703
AA seq 235 aa
MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVIVDGNTVNLGLWD
TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELKHYAPGVPVILVGSKL
DLRDDKQFFIDHPGSQPITTAQGEELKRTIEAPAYIECSSKTQQVCRIHNATNFQIVTSL
LISFHFIENMICRILRVFSIWQSRWFFNLQNKRRIKGRGCVPFYEYEMDHGHLSS
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagtgcctcgaggttcatcaagtgcgtcacggtgggtgacggcgccgtcggcaagacc
tgcatgctcatatcctacaccagcaacacattccccacggattatgttccgactgtgttc
gacaatttcagtgcgaatgtgattgttgatgggaacacagttaacttgggcctctgggat
actgcaggtcaagaggattacaacagactcagaccattgagctaccgaggtgccgatgtc
tttctactagctttctctttgataagtaaagctagttacgagaatgtggccaagaagtgg
attcctgaactgaagcactacgcccctggtgtgccagttattctcgtcgggtcaaagctc
gatctccgtgatgataaacagtttttcatcgatcacccgggttctcaaccgataactact
gctcagggggaagagctgaagagaaccatcgaagcccctgcctatatcgaatgcagttcc
aagacacaacaagtatgtcgcatccacaatgctacaaactttcagatcgtaacatcttta
cttataagtttccactttattgaaaatatgatatgcagaatattaagggtgttttcgata
tggcaatcaaggtggttcttcaacctccaaaacaaaagaagaataaagggaaggggctgt
gttccattctatgaatacgaaatggatcacggccacctttcctcatag

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