Zingiber officinale (ginger): 122015364
Help
Entry
122015364 CDS
T08725
Name
(RefSeq) pleiotropic drug resistance protein 2-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122015364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122015364
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122015364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
Rad17
AAA
AAA_25
nSTAND3
RsgA_GTPase
AAA_30
AAA_28
ABC_ATPase
ABC2_membrane_3
AAA_11
Motif
Other DBs
NCBI-GeneID:
122015364
NCBI-ProteinID:
XP_042428153
LinkDB
All DBs
Position
8B:complement(74326674..74340955)
Genome browser
AA seq
1456 aa
AA seq
DB search
MTNDLTRNSSSRRSWADSFRDRADVFRRSLVEEEGDDEENLKWAALEKLPTYDRMRKGII
RQVIDNGNVIASEVDVNNLGPQDRKRLLEQIFKVVEEDNERFLIRLRDRIDRVGLELPKI
EVRYENISVEADVYIGSRALPTLWNFTINILEDIFGLVRFNQSRKKTIKILKDVSGILKP
TRMTLLLGPPASGKTTLLLALAGKLDKRLRQWGKVTYCGHELSEFVPQRTSAYISQLDIH
NGEMTVRETLDFSARCLGVGSRYEMLSELSRRERDAGIKPDPEIDAFMKAAAVEGQRTNV
STDYVLKVLGLDICADILVGDQMRRGISGGQKKRVTTGEMLTGPARALFMDEISTGLDSS
TTFQIIKFIRQMVHVMDGTVLISLLQPAPETFELFDDVILLSEGQIVYQGPREHVVEFFE
FVGFRCPERKGVADFLQEVTSLKDQEQYWYNKDKPYRFISVSEFVELFKQFHVGQELYAE
LTISYDKSKAHPAALTTRKYGISNWELLKACLSREWLLMKRNSFVYIFKTTQITTLSLIA
MTVFLRTKMHHETIPDGNKFYGALFFTLTNVMFNGMAELVMTVEKLPVFYKQRDFLFYPA
WAFGIAYCLLRIPLSFLDTGIWIILTYYVIGFAPAASRFFRQFLALLLVHQMALGLFRFI
AAAGRTMVVANTFGTFALLIVFVLGGFVISKDDIKSWWIWGFWSSPLMYGQNAIAINEFL
DPRWGAPNNDTNIDALTVGTAILKSRGMFSRGYWYWLAIGALIGFIILFNVLFVLALTYL
NPLASAQNAIVDEESSKKKKTSSILNRRIEMIGSIAHSDPQDLSESTRRNNSETFSASVH
SAKRGMVLPFQPLSLAFNHVNYYVDMPAEMKRRGIEEDRLQLLCAISGAFRPGVLTALVG
VSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQETFARISGYCEQNDIHSPYMTIYES
LVYSAWLRLAPEIDKQTRMMFVEEVMELVELDTLRDALVGVPGVDGLSTEQRKRLTIAVE
LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM
KRGGQVIYAGPLGRHSHKLIEYFEAIPGVPKIVEGVNPATWMLEISTPQVEASLNVDFAE
IYSNSELYKQIQELIKELSIPPPDSKDLYFPKKYSQSFTTQCQACFWKQYWSYWRNPQYN
AVRFFLTIIIALIFGTMFWQMGDKTSTQQDVLNLVGAFYAAVFFLGSSNSINVQPVVAVE
RTVFYRERAAGMYSAMAYAFAQVSIEALYIFVQGFIYTILLFSMIGFTWHAENFFWLFYF
IVMSFTYFSLYGMMAVALTPNHQVAGIVSSFFYNFWNLFSGFLIARPDIPIWWRWYYWGN
PVSWTIYGVIASQLGKKGGTVQIPGEHDKPLTEYLKDNLGYEYSFVKWAALTNLGFVIMF
FFVFAYSIKFLNFQKR
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgatctcactagaaacagcagcagtcggcggagctgggctgacagcttccga
gacagggcagacgtattccggcgcagcctggtggaggaggagggcgacgatgaggagaat
ctcaagtgggcagcgctggagaagctgcctacatacgaccgtatgcgcaagggcataatc
cgtcaggtgatcgacaacggaaacgtcatcgccagcgaagttgatgtcaacaatcttggc
ccccaggatcggaagcgcctcctcgagcagatcttcaaggtggtggaggaggacaacgag
cgcttcctcattcgcctccgcgatcgaatcgaccgggtggggctggaacttccaaagatt
gaggtacggtatgagaacatatccgtggaggcagatgtttatattggaagcagagcacta
cccaccttgtggaatttcaccataaacattcttgaggatatctttggtcttgtaagattc
aaccaatccaggaaaaagaccataaaaattcttaaggatgtcagtggaatactcaagcca
acaagaatgacattgctgcttgggcctccagcctcagggaaaacaacactattgcttgca
ctagctgggaaacttgataagagactaaggcaatggggtaaagtcacatattgtggccat
gaactctcagaatttgttcctcaaagaacatctgcttacattagtcagttggacattcac
aatggtgagatgacagttagagaaacattggatttctcagcacgatgtttaggtgtggga
tcaaggtatgaaatgttatcagaattgtcaagacgagagagagatgcaggaattaaacca
gatcctgagattgatgcattcatgaaggctgctgcagttgaaggacaaagaactaatgta
tcaactgactacgttctaaaggtacttggtttggatatatgtgcagacattttggttggt
gatcagatgcgtcgaggcatttctggggggcaaaagaaacgagtgacaacgggagagatg
ctaactgggcctgcacgagcactcttcatggatgaaatatcaactggacttgacagttct
acgacctttcaaataataaagttcattaggcaaatggttcatgtcatggatgggacagtg
cttatatctctccttcaacctgcacctgagacatttgaactttttgatgatgttattcta
ttatcagagggtcaaatagtctatcaaggtcctcgagagcatgttgttgagttctttgag
tttgttggctttagatgtcctgaaaggaaaggagttgctgactttcttcaagaggtaact
tctttgaaggatcaagaacaatattggtacaataaggacaaaccataccgttttatttca
gtctctgagtttgtggagctttttaagcaatttcatgtcgggcaagaactatatgcagag
cttactatttcttatgataaatctaaagcacatcctgccgcactgacaacacggaaatat
ggcatttctaattgggaacttcttaaagcatgtttatcaagggagtggttgttgatgaaa
agaaactcttttgtctacattttcaagacaacccagataactacactttctttaatagcc
atgactgtgtttctaagaaccaaaatgcatcatgaaacaatccccgatggcaacaaattt
tatggtgcactcttcttcactttaaccaatgtcatgttcaatggaatggcagaactggtg
atgactgttgagaaactccctgtgttctataaacaaagagatttcttgttttaccctgct
tgggcttttggcattgcatattgtctcctcaggatccctctttctttcttggacactgga
atttggatcatacttacctattatgtgattggttttgcccctgctgcaagccggttcttc
cgccagttcctagcacttctccttgtacatcagatggctcttggcctgttccgcttcatt
gctgcagctggaagaaccatggttgtagccaatacatttggaacatttgctttgcttatt
gtttttgtgctaggaggctttgttatttctaaagatgacatcaaatcctggtggatatgg
ggtttctggagttcccctttaatgtatgggcaaaatgctattgctattaatgagttcctt
gatccaagatggggtgcaccaaataatgacaccaacatagatgcattaactgtaggaact
gctatactcaaatctagaggaatgttttcccgtggctattggtattggcttgctattggg
gctctcatcggatttattattctgttcaacgtattatttgtccttgcgctcacctacttg
aatcctttggcaagtgcacaaaatgcaattgttgatgaggaatctagtaagaaaaagaaa
acttcatcaatattaaatagaaggattgaaatgataggaagtatcgcacattctgatcca
caggatttatcagaatcaacaaggagaaacaactctgaaacttttagcgcttcagtacat
tcagcaaagcgaggaatggttttgcctttccagcctctctctcttgctttcaatcatgtg
aactattatgttgacatgcctgctgaaatgaagagacgaggaattgaggaagatcgtctt
caattactatgtgctataagcggtgcatttaggcctggagttttgaccgcattggttgga
gtaagtggagccggaaagactacattgatggatgttctagcaggaaggaaaactggtggt
tatattgaagggagcattagtatttctggttatcctaaaaatcaagagacttttgctagg
ataagtggttactgtgaacagaatgacattcactcgccatatatgactatttatgaatca
cttgtttactctgcttggctgcgtcttgcacctgaaattgacaagcagacacgaatgatg
tttgtggaagaggttatggagttggttgaacttgacactttgagagatgctctagttgga
gttccgggggttgatggtctatcgactgagcaacgaaaaagactcacaattgctgttgag
cttgttgcaaatccttccatcatattcatggacgagccaacatcaggactcgatgcaaga
gctgcagccatagttatgaggacagttaggaatacagtggatacaggacgcaccgttgtt
tgtacgatccaccaaccaagcatagatatttttgaagctttcgatgagcttcttttgatg
aaaaggggaggtcaagttatttatgctggccctcttggtcgccactcccacaagctgatc
gaatatttcgaagcaattccaggtgtaccaaagatcgtagaaggtgtgaaccctgcaaca
tggatgttggaaataagtactccccaagttgaggctagcttgaatgtagactttgctgaa
atttattcgaattcggaactttataaacaaattcaagaacttatcaaggaattgagcatt
ccaccaccagattctaaggatttatatttccctaaaaagtactcccagagttttactact
caatgtcaggcttgcttttggaaacaatattggtcatattggagaaacccacaatataat
gctgtccgatttttcttgacaatcatcatagccttaatatttggcacaatgttttggcag
atgggagacaagacttcgactcaacaagacgttttgaatctagttggagctttctatgct
gcggtctttttccttggttccagcaactctatcaatgtgcagcctgttgtggctgttgag
agaacagtcttctatcgtgaaagagcggcagggatgtactcagccatggcctacgcattt
gctcaagtgagcattgaggcactatacatatttgttcagggattcatctatacaattctc
cttttctcgatgattggctttacttggcatgcggagaacttcttctggctcttctacttc
attgtaatgtcctttacctacttttcactttatggtatgatggctgtggcactcacaccc
aaccaccaagttgccggtattgtgtctagtttcttctacaacttctggaacttgttctca
ggcttcctgattgcacgaccggatattcccatatggtggaggtggtactactggggaaat
ccagtatcttggacaatttatggtgtcatagcatcgcagttggggaaaaaggggggcacc
gttcagattcctggagaacatgataaaccacttacagaatacttgaaagataacctgggt
tatgagtatagctttgttaagtgggcggcattgactaacttgggctttgtcatcatgttc
ttttttgtctttgcatattctatcaagttcctcaacttccaaaagagatag
DBGET
integrated database retrieval system
