Zingiber officinale (ginger): 122015405
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Entry
122015405 CDS
T08725
Name
(RefSeq) heat shock cognate 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
zof04141
Protein processing in endoplasmic reticulum
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122015405
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122015405
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122015405
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122015405
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122015405
03009 Ribosome biogenesis [BR:
zof03009
]
122015405
03110 Chaperones and folding catalysts [BR:
zof03110
]
122015405
04131 Membrane trafficking [BR:
zof04131
]
122015405
03051 Proteasome [BR:
zof03051
]
122015405
03029 Mitochondrial biogenesis [BR:
zof03029
]
122015405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122015405
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
122015405
Spliceosome [BR:
zof03041
]
Complex B
Other components
Prp19 complex
122015405
Complex C
Prp19-CDC5 complex
122015405
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122015405
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP70 / DNAK
122015405
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
122015405
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
122015405
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122015405
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
122015405
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122015405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DUF2200
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
122015405
NCBI-ProteinID:
XP_042428210
LinkDB
All DBs
Position
8B:complement(28849071..28851547)
Genome browser
AA seq
644 aa
AA seq
DB search
MAGGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAK
NQVAMNPTNTVFDAKRLIGRRYSDPSVQGDIKLWPFKVIAGPGDKPMIVVQYKGEEKQFS
AEEISSMVLTKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINE
PTAAAIAYGLDKKGSSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDF
YSTITRARFEELNMDLFKKCMEPVEKCMRDAKMDKSSVDDVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVHDLLLLDVTPLSLGLETAGGVMTVL
IPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQ
INVCFDLDANGILNVSAEDKTTGQKNKITITNDKGRLSKAEIEKMVQEAEKYKAEDHKKK
VEAKNALENYAYNMRNTIKDDKIAGKLPPADKKTIEDAVERAIRWLDGNQLAEAEEFEDK
MKELEGICNPIIAKMYQGGAAAGMDEDAPASSGAGAGPKIEEVD
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctggtggcaagggtgagggtccggcgattgggatcgatttgggaaccacctactcg
tgcgtcggagtatggcagcacgaccgggtggagatcatcgccaatgaccagggcaatcgc
accaccccttcctacgtcgcgttcaccgacaccgagcggctcataggcgacgccgccaag
aaccaggtcgccatgaaccctaccaacacggtgttcgatgccaaacgtttgatcgggagg
cgttacagtgatccctccgttcaaggcgacatcaagctatggcctttcaaagtgattgct
ggccccggcgacaagcccatgatcgtcgtccagtacaaaggcgaggagaagcagttctcc
gccgaggagatctcctccatggtgctaaccaagatgaaggagatcgccgaagcctatctc
ggaaccaccgtgaagaacgccgtggtcacggtccctgcctacttcaacgactcgcagcgg
caggccaccaaggacgccggagtcattgccggcctcaatgtactgcgaatcatcaacgag
cccacggcagcagccatagcctacggcctcgacaagaaggggagcagctctggcgagaag
aacgtgctgatctttgatctcggcggcgggaccttcgatgtttctcttctcaccatcgaa
gagggtatctttgaggtgaaggcgacagctggcgacacgcacctcggcggcgaggacttc
gataacaggatggtgaaccacttcgtgcaggagttcaagaggaagcacaagaaggacatc
agcggcaaccctagagctcttcggcggctcagaacagcttgcgagagggcaaagcgaact
ctctcctcaaccgcccaaaccacgatcgagatcgactctctgttcgaaggcatcgacttc
tactccaccatcacccgagctcgatttgaggagctcaatatggacctctttaagaaatgc
atggagccggtggagaagtgtatgagggatgcaaagatggataagagtagcgtcgacgac
gtggtgctcgtcggtggatcgacgaggatcccgaaagtccaacagctgctccaagacttc
ttcaatggcaaggagctatgcaagagcatcaacccggacgaggccgtagcctatggcgcc
gctgtccaagccgccatcctgagcggcgagggaaacgagaaggtgcatgacctgctgctc
cttgacgtcacacctctctcgcttgggctggagaccgccggtggcgtcatgacggtcttg
attccgagaaacacgacgatacccaccaaaaaggaacaagttttctccacctattctgac
aatcagcccggcgtactaatccaggtctacgagggcgagcgagctcggaccaaggacaac
aacctccttggtaaattcgagctctccggcattcctccggcccccagaggtgtacctcag
atcaatgtctgcttcgacctcgacgccaacggcatcctcaacgtctcggcagaggacaag
accaccgggcagaagaacaagatcaccatcaccaatgacaaaggcaggctcagcaaggca
gagatcgagaagatggtccaagaggccgagaagtacaaggccgaggatcacaagaaaaag
gtggaggccaagaacgccctagagaactacgcatataacatgaggaacacaatcaaggat
gataagatcgccggcaagctgcccccagctgacaagaagacgatcgaagatgcagtggag
agggccatcagatggttggatgggaatcagctggcggaggcggaggaatttgaggacaag
atgaaggaactggaaggtatctgcaaccccatcatagccaagatgtatcagggaggagca
gctgctggcatggatgaagatgctccagcatcgtctggtgccggagcagggccgaagatc
gaagaagtcgattaa
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