Zingiber officinale (ginger): 122015409
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Entry
122015409 CDS
T08725
Name
(RefSeq) syntaxin-52-like
KO
K08503
syntaxin of plants SYP5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122015409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122015409
Membrane trafficking [BR:
zof04131
]
SNARE
SNAP-25[C] (Qc)
STX8
122015409
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GFIT
Motif
Pfam:
SNARE
SPAM
FapA
NPV_P10
STX6_10_61_N
DUF5345
YjcZ
XhlA
Motif
Other DBs
NCBI-GeneID:
122015409
NCBI-ProteinID:
XP_042428216
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All DBs
Position
8B:28851757..28855770
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AA seq
233 aa
AA seq
DB search
MATSLDQWMREFNEASRLSDEINAMISQRGSLPPSGPETQRQLTAMRRKITILRTRLENL
EALLSKLPSIQPIKDKELHKRREMLSNLKSKATQMASILNMSNFGNREDLLGDSKKPVDV
ATRTAELDNQGIVGLQRQIMREQDEGLEKLEETVLSTKHIALAVNEELDLHTRLINDLDQ
QVDVTDSRLQRVQKRLAILNKRTKGGCSCMCLLLSIVAIVALTVVIWTLIKYL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctttggatcaatggatgagggagttcaatgaagcatcaaggctttctgac
gaaatcaatgctatgatttctcaaaggggctctttgcctccgtcaggtcctgaaacccaa
cgtcaattaactgcaatgaggaggaagataacaattcttaggactagattggagaacttg
gaggcccttctttcaaagcttcctagcatacagccaataaaggataaagagttgcataag
cggcgagagatgctatcaaatctaaaatctaaagcaactcagatggcatccatattaaac
atgtccaacttcggaaacagggaggacttgcttggagatagtaaaaagccagttgatgta
gcaacaagaactgctgagttggataatcagggtattgttggtttacagagacagattatg
agagagcaagatgagggccttgaaaagttggaggagactgtgttaagcacaaaacacatc
gcattagcagttaacgaggaattggatctgcacacaagattaattaacgatctggaccag
caagttgatgtaacagactcaaggctacagagagttcaaaagagactggcaatcctcaac
aagcgcacaaaaggcggttgctcgtgcatgtgtctgctcttatccatcgttgcaattgta
gctctgactgttgtgatttggactctcatcaagtacttgtag
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