Zingiber officinale (ginger): 122015451
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Entry
122015451 CDS
T08725
Name
(RefSeq) alpha-humulene synthase-like isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
122015451
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
122015451
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
CREPT
Motif
Other DBs
NCBI-GeneID:
122015451
NCBI-ProteinID:
XP_042428271
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Position
1A:complement(2386244..2389000)
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AA seq
550 aa
AA seq
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MERQSMVLVGGDEEEIIRKSAEYHPTVWGDYFIRNCSCLPLEKKEYMIKRVEELKERVRN
LFEETRDVLQIMILVDSIQLLGLDYHFEKEITAALRLIYEADVENYGLYEVSLRFRLLRQ
HGYYLSPDVFNKFKDDKGRFLSALNGDAKGLLSLYNAAYLGTHEEMILDEAISFTKYQLE
SMLGELERPLATEVSLFLETPLYRRSRRLMVRKYIPIYQENLMRNDTILELAKLDFNLLQ
ALHREEAKKITIWWNDLALAKSFKFARDRVVECYYWIVTMFFEPQYSRARVITSKAISLM
SIMDDIYDNYSTMEESRLLTEAIERWEPQAVNHVPEYLKDFYLKLLATCKDFEDELEPHE
KYRIPYLREEIKGLSRCYFQEVQWGAEGYVPSVEEHLTVSWKSTGYPAITCASYVGMVED
ATKEAFEWVASFPKILKSSSIICRLMDDITSHELEQERDHVASTVESYMKEYGTNVKVAR
EKLRVMVERAWKDLNEECLRSTQVARSLIEIILNLSRAMEDIHKYIDGYTNSNTRMKDHV
SLILVESFPI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcagtcgatggtccttgttggtggtgatgaggaagagataattcgtaagtca
gctgaatatcaccctactgtttggggtgactatttcatccggaactgctcctgtttgccc
ctcgaaaaaaaggagtacatgataaagagggtggaagagttaaaagagcgagtgagaaac
ctattcgaagaaacacgtgatgtattgcaaattatgattttggttgattcgattcaactt
cttggattggattatcattttgagaaagaaataactgcggcactaagattgatttacgag
gctgatgttgagaattatgggctttatgaagtttctcttcgatttagattgcttaggcaa
catgggtattatttgtctccagatgtttttaacaagttcaaagatgataaaggaagattt
ttgtcggccttgaatggagatgcaaagggactactaagcttatacaacgcggcttatctc
ggaacacatgaagaaatgatacttgatgaagctatttcttttacgaagtaccaacttgaa
tctatgttgggtgaacttgaacgacctttagcaacagaggtgtctcttttccttgaaacg
ccactatatcgaagaagtagaagactcatggtgagaaaatatatacctatttatcaagag
aatttgatgcgaaatgatactatattagaacttgcaaagttggatttcaacctactacaa
gctcttcatcgagaggaagcgaagaaaattacaatatggtggaatgatttagccctagct
aaatcttttaaatttgcccgtgatcgagtggtagaatgttattattggatagttacaatg
ttttttgaacctcaatactctcgtgcacgagtaattacttctaaggctatttctcttatg
tcaattatggatgacatctacgataactatagcacaatggaagagagtcggctattaacc
gaggcaatcgaaaggtgggaacctcaagctgtcaatcatgtaccagaatacttaaaagac
ttctatctcaagctacttgcgacttgcaaagattttgaagatgaattagaaccccatgag
aaatatcgcataccatatcttcgagaggaaataaaaggtctatcaagatgttatttccaa
gaagtacaatggggtgcggaaggatatgtgccatcagtcgaggagcatctgactgtttca
tggaaatccaccgggtatcctgcgattacatgtgcctcttatgtaggtatggtagaagat
gcaacaaaagaggcatttgaatgggttgctagttttcccaagatccttaaatccagcagt
ataatttgtagacttatggatgatataacttcgcatgagttggagcaagaaagagaccat
gtcgcttcgacagttgaaagttacatgaaagaatacggtaccaatgtaaaagtggcacgt
gagaagttgcgagtgatggtggagcgagcatggaaggatttgaacgaggaatgcctccgt
tcaacgcaagtagctcggtctttaattgaaataatattgaacctttcaagagccatggaa
gatatacacaagtacatagatggctatactaattccaacactaggatgaaagaccatgtc
tctctcatattggttgaatccttccctatttaa
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