Zingiber officinale (ginger): 122015457
Help
Entry
122015457 CDS
T08725
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122015457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122015457
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
GTPases
122015457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EF-G_D2
EFL1
EFG_III
GTP_EFTU_D2
SRPRB
MMR_HSR1
RsgA_GTPase
EFG_IV
Motif
Other DBs
NCBI-GeneID:
122015457
NCBI-ProteinID:
XP_042428281
LinkDB
All DBs
Position
8B:93351786..93356213
Genome browser
AA seq
1030 aa
AA seq
DB search
MGDLSCSKIRNICILAHVDHGKTTLADHLIAACGGGVLHPKLAGRLRYMDYLDEEQRRAI
TMKSSSIALHYKDYNINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWVEKLTPCLVLNKIDRLITELKLSPMEAYNRLQRIVHEVNAIVSAYKSEKYLSDVDSL
LAGTSGDVDQGLVEVEDDEEDMFQPQKGNVAFVCALDGWGFCINHFAEFYASKLQFSMSA
LIKGLWGPWYYHTKKMMIVGKKGIEGVSKDPQPMFVKFVLNPLWQVYQAALEADGDIRML
SKVISSFNLSVPQRELENKDKKVVLQAVMSRWLPLSDTILSMVVKCMPDPVSAQATRICR
LLPKRELVVNNSSLYDIFSEAENVRKCVEYCDSRAEAPCIAFVSKMFALPFKMLPTKGPN
GEFLNNQLTGEVGESGECFLAFARIFSGVLHSGQKVFVLSSVYDPLKGESMNRHVQEAEL
QSMYLMMGQGLLPVSSASAGNVIAIQGLGQYILKSATLSSTRNCWPFSSMMFQVAPTLRV
AIEPSNPADMGALLKGLKLLNRADPFVEITVSSRGEQVLAAAGEVHLDRCIKDLKERFAK
VCLEVSPPLVSFKETIEGEGINLIENSKVSLCSTEYVERTTPNGRCVLRVQVMKLPKTLT
TVLEECSDMLGDFLEGQSRKRDGALGSHIAQDDGEVVGVVRKRILDALESELGVSVKNDQ
DRVERYRKMWSEYLGRLWSLGPSHVGPNVLLAPDSKASNISNFSLGQKGILIQGSCDVSK
RLGFFSDAGLESGTSSLSTEETAEETESLYREAEALKSSIVSGFQLATAAGPLCDEPLWG
LAFLVEPYLFQESSEASSQSDQYGMLSGQVMTAVKEACRAAVLQNKPRLVEALYFCELTT
PTEYLGAMYGVLGKMRARVLKEEMQEGSSLFTVHAYVPVAESFGFADELRKRTSGAASAL
LVLSHWEELPEDPFFVPKTEEEIEEFGDGSSVLPNISRKLMNSVRRRKGLHVEEKVVQHA
TKQRTLARKV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatttgagctgcagtaagatccgaaacatttgcatccttgcccatgttgatcat
ggaaagacaacccttgctgaccatctgattgctgcatgtggtggtggggtcctccaccca
aagcttgcaggtcgactgaggtatatggactaccttgatgaggagcaacgacgggctatc
actatgaaaagttcttccattgctctccactacaaggactacaatattaatcttattgac
tcccctgggcacatggatttctgtagtgaggtatcaacggctgcacgtttgagtgatggg
gccttagttttggttgatgcagttgaaggagttcatatccagacacatgcagtccttcgg
caggcttgggtggagaagttgactccttgcttggtcttgaacaagattgacaggctaatt
actgaacttaaattgagtccaatggaagcttacaacagactacagaggatagttcatgaa
gtcaatgcaatagtgagtgcatataagtctgaaaagtatctttctgatgtcgattctctt
cttgctgggacatctggggatgtggatcaagggttggttgaagtggaagatgatgaggaa
gacatgttccaaccccaaaaggggaacgttgcatttgtttgtgcattggatggttggggt
ttctgcataaaccattttgctgaattttatgcttctaagcttcaattcagtatgtcagct
ttgataaaggggttatggggaccgtggtattaccatacaaagaaaatgatgatcgtgggg
aaaaaggggatagaaggtgttagtaaagatcctcaaccaatgtttgtgaagtttgtgctt
aaccctctgtggcaggtctaccaggctgctctagaagctgatggagatataaggatgctt
tccaaggttataagttccttcaatttatctgtaccacaaagggagcttgaaaacaaggac
aaaaaggtggttcttcaggctgtcatgagccgttggcttccgttgtcggacacaattcta
tcaatggtagtcaagtgcatgcctgaccctgtttctgcccaagccactcgcatttgcagg
ttgcttcctaagagagagttagtggtaaataattccagtctgtatgatatattttctgaa
gccgagaatgtgaggaaatgtgttgagtattgtgactctagggctgaagctccatgtata
gcatttgtttctaaaatgtttgctcttccatttaagatgctaccaacaaagggtccaaat
ggagagtttttaaacaatcaacttactggtgaagtcggagaatctggtgagtgtttcctt
gcatttgcaagaatttttagtggggtactgcactcagggcagaaagtctttgtgctctca
tctgtatatgatccgctgaaaggagaatccatgaacagacatgtacaagaggctgagctt
caatctatgtatttaatgatgggccagggtttgttaccagtttcatcagcaagtgcagga
aatgtcattgcaattcaaggactaggtcaatatattttgaagagtgcaactctctcatct
acaagaaactgttggcctttttctagtatgatgtttcaagtggcacctactcttagggtt
gctattgagccttcaaatccagcagacatgggtgcacttttgaagggactaaagcttctc
aatcgtgcagatccttttgtagagataactgtttcttccagaggtgagcaagtgcttgca
gccgctggagaggttcacctcgatagatgcataaaggacttgaaagaaagatttgccaag
gtttgcttggaagtttcaccccctcttgtctcatttaaagagaccattgaaggggagggc
attaatttaatagagaattcaaaggtctctttatgttctactgaatatgttgagagaact
accccaaatggtagatgtgttttaagggtgcaagtcatgaaacttcctaaaactctaaca
acggttcttgaggaatgttctgatatgttgggagattttctagaagggcaatctagaaag
agagatggagccttaggctctcacattgctcaggatgacggtgaagttgttggagttgtc
cgaaagagaatacttgatgctttagaaagcgaattaggtgtttctgtgaaaaatgatcaa
gatagagttgaaaggtatcgcaaaatgtggtctgaatatttagggaggttatggtcactt
ggtccttcacacgtggggccaaatgttcttcttgcaccagattccaaagcaagcaacatt
tctaatttcagtctaggtcaaaagggtattcttatacagggttcatgtgatgtttctaaa
agattagggttctttagtgatgctggtctagaatctggtacaagttctctgagtactgaa
gaaacagcggaggaaactgagtcactgtatcgagaagcagaagctcttaaaagcagcatc
gtgtctgggtttcagttagcaacagctgcagggcctttatgtgatgagcccctgtggggt
ttggcatttctagtcgagccttatctcttccaagaaagctctgaggcttccagtcagtct
gatcagtatggtatgttgagcgggcaagtgatgactgcagttaaggaagcttgtagggca
gcagtacttcaaaacaagcctaggcttgtggaagctttgtacttttgtgagttgactacg
ccaacagaatacttaggagcaatgtatggagttcttggaaagatgcgtgctagagtattg
aaggaagaaatgcaggaaggctcctccttgtttacagtgcacgcttacgtccctgttgca
gaaagttttgggttcgctgatgaactcaggaaaagaacttcaggcgctgcgagtgctctg
cttgttcttagtcattgggaggaactaccagaagaccctttttttgttccaaagacggag
gaagaaattgaggagtttggagacggctccagtgttcttccaaacatttcaaggaagctt
atgaattctgtgaggcgaaggaagggccttcatgtggaagaaaaagttgtacaacatgca
acaaagcagaggacactagcccggaaggtgtga
DBGET
integrated database retrieval system
