Zingiber officinale (ginger): 122015474
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Entry
122015474 CDS
T08725
Name
(RefSeq) pentatricopeptide repeat-containing protein OTP51, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122015474
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122015474
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_1
DUF4522
Motif
Other DBs
NCBI-GeneID:
122015474
NCBI-ProteinID:
XP_042428315
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Position
8B:19601262..19604213
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AA seq
785 aa
AA seq
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MSVAFYHASALTSTLASPSTPIRIRHRALCQNRASCLTFRPLRAHASDNVTISPKSSSFS
ISVPQQQAEASDEEDLEEKEPPSVEQWFHDVAQERDMRSLPSPELQVVQLEDLPEQWRRS
KIAWLCKELPSYKHSTFVRILNAQRKWIRQEDATYVAVHCMRIRENEASFRVYKWMSQQH
WFRFDLPLATKLADYLGKDRKFAKCREIFDAIVNQGRVPSESTFHILTVAYLSAPVEGCL
HEACGIYNKMIQLGGYMPRLSLHNSLFRAIMSQPSGKVKHYLRQAEFIFHNIITCDLEVH
QDIYAGLIWLHSYQDTIDTERIAALRKEMKIAGFKESTDVLISIMRAYSKEGNVEETENT
WLKLLRGDCSIPPKAFVYRMDLYARVGEPMKSLEIFDTMKKQNIPVSSAAYLKIIEVMSK
AEEIEFAEAIFEEYIGTGMKHLMPAYEDLISMYFSLGLDDKLVTTFYQCLTKCSPNRRIY
NIYLESLVRVGNLEKAEDVFNEMHSNGTIGSSARSCNAILEGYLASRDCVKAEKIYDIMR
LKKYELKAELLEKLQEVISLNRKIVKRKISMKLNNEQREILVGLLLGGVRIESDEERRNH
AIFFEFDQNSKVHSSLKVHIHERFYEWLTSSSRSTDDDKVLNQFCTVAHSYFGFFADQFW
LNGRPMIPKLIHRWLSARVLAYWYMFGGLRISSGDILLKLKGGGCGGTERIIKSLQARSL
ECRTKRKGRVFWIGFQGANADRFWELTEPYILATVKSHLDPGGCVSVNGEEEVEFNTLES
ESDID
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgccttctaccacgcctccgctctcacaagcaccctggcctccccctccact
cctatccgcatacgccaccgcgctctctgccaaaaccgcgcctcctgccttactttccgc
ccgttgcgggctcacgcttccgataatgttacaatttcgcctaaaagttcttccttttcg
atttcggtgccgcagcagcaagcggaagcatcagacgaggaggatttggaagaaaaggag
cctccttccgtcgagcagtggttccatgacgtggcccaagagagggatatgaggtcactc
ccctcgcccgagctccaggtggtccagctcgaggatctcccagagcaatggaggaggtcc
aagatcgcgtggctctgcaaggaactgccgtcctacaaacactccactttcgtcagaatc
ctcaacgcgcagcgcaagtggatcaggcaagaagacgccacctacgtcgctgtccactgt
atgcgaatccgggagaacgaagccagcttccgggtgtacaaatggatgtcacagcagcac
tggttccgctttgatttacctcttgcgacaaagcttgctgattatttgggaaaggaccgg
aaatttgcaaaatgtcgagagatctttgacgctatcgtgaatcaaggtcgtgtccccagt
gagtccacttttcacatattgacagtagcttatctgagtgcacctgtcgaaggttgcctc
catgaagcttgcggcatctataacaagatgattcaattgggcggctatatgccacgcctg
agcttgcacaactctctcttcagagccatcatgagtcagccgagtggtaaagtaaagcat
tatcttagacaagctgagttcatcttccacaacataatcacttgtgatcttgaggtgcat
caagatatctatgctggtttgatctggctccacagctatcaagacaccattgacacggaa
aggattgcagctctaaggaaagaaatgaaaattgctgggttcaaagagagtacagatgtt
ctcatctccatcatgagggcttactcgaaagaaggtaatgtagaagaaacagaaaacaca
tggctcaagcttcttcggggtgattgtagtatcccacctaaggcttttgtttatcgcatg
gacctttatgcaagagttggagagcccatgaaatcactggagatatttgatacgatgaag
aagcaaaatatacctgttagttcggctgcatatcttaaaatcattgaggtcatgtcaaag
gctgaggagattgaatttgctgaagcaatttttgaagagtacattggaactggaatgaaa
catcttatgcctgcctatgaagatttgatatctatgtacttcagtttgggtttagatgat
aagttggtaacaacattctatcaatgcctgaccaaatgcagtcccaataggaggatctat
aatatatacctggagtccttggtgagagttggcaaccttgagaaggctgaagatgtattt
aatgagatgcattcaaatgggacaattggtagtagtgcccggtcatgtaatgccattttg
gaaggctatcttgcttcaagagattgtgttaaagctgaaaagatatatgatatcatgcgc
cttaaaaaatatgaactaaaggctgaacttttggaaaagctacaagaagttattagcttg
aataggaagatagttaagagaaaaataagcatgaagctcaacaacgaacagcgtgaaatt
ctagttggcttactactaggaggtgtaagaatagaatcagacgaggagaggaggaatcat
gccatattttttgaatttgatcagaattccaaggttcactcttctctaaaagtacatatt
catgaaaggttttatgaatggttaacatcttcaagtaggtctacagatgatgacaaggta
ttaaatcaattttgtactgtggcacactcttattttggtttctttgccgatcagttctgg
ttgaacggccgacctatgattccgaagcttattcataggtggttatcagctcgtgttctt
gcatattggtatatgtttggaggattgagaatttcctcaggtgatattttgttgaagctg
aaaggcggtggctgcggaggcactgaaaggatcatcaaatcattacaggcaagatcctta
gaatgcagaaccaaaaggaagggaagagtgttttggataggatttcaaggagccaatgcc
gatagattttgggaactcactgaaccctacattttggcgactgttaagagtcatttggat
cctggtggttgtgtctcagttaatggagaggaagaagttgaattcaataccttggagtct
gagtctgatatcgattga
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