Zingiber officinale (ginger): 122015548
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Entry
122015548 CDS
T08725
Name
(RefSeq) oligoribonuclease-like isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122015548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122015548
03009 Ribosome biogenesis [BR:
zof03009
]
122015548
Messenger RNA biogenesis [BR:
zof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
122015548
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
RNases
122015548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Stm1_N
Motif
Other DBs
NCBI-GeneID:
122015548
NCBI-ProteinID:
XP_042428438
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All DBs
Position
8B:complement(67071072..67079074)
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AA seq
261 aa
AA seq
DB search
MSNLSNIFSILEVDAEDDKEQIISIAVAKDAKKDKKSVLLLTDVTKTKNQRPRENTNTRD
DKVEQQTFASPSEDYRMPLVWIDLEMTGLHIDVDQILEIACVITDGKLTKSVDGPDLVIK
QPKECLDKMGEWCRDHHAASGLTERVLKSTVTEADAENQVIDFVKKHVGSQTPQLAGNSI
YMDFLFLKKYMPSLAAMFSHVLVDVSSIMALCIRWFPKEKKNAPEKTQRHRAMDDIKESI
NELKYYKQAIFKAPNNAKYRH
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatctttcaaatattttctctattctggaagtggatgctgaagatgataaagaa
cagataatttctatcgcagttgccaaagatgcaaaaaaggataaaaaatcagtacttctc
ctaacagatgtgacaaagactaaaaatcaaaggccaagggaaaatacaaacacgagagat
gataaagtagaacaacaaacatttgcatcaccttcagaagactacagaatgcctcttgtg
tggattgacttggaaatgacaggtttgcatattgacgttgatcagatattggagattgca
tgtgttataacagatggtaaattaaccaaatcagttgatggtccagatttggttattaaa
caaccaaaagagtgcttggacaagatgggagaatggtgtcgtgatcatcatgcagcaagt
ggtttgacagagagagtgttaaaaagtacagtaacagaagcagatgcggaaaatcaagtt
atagactttgtgaagaagcatgtgggttcacaaactccacagttggctggaaattctatt
tatatggattttctcttcttgaagaagtatatgccttctctggctgccatgttttctcat
gtgctagttgatgttagcagcattatggctttatgcatccgttggtttccaaaagagaag
aaaaacgcaccagaaaagactcaacggcatagagctatggatgacatcaaggagagcatc
aatgaattaaaatattacaaacaagccatcttcaaagcaccaaacaacgccaagtacaga
cactga
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