Zingiber officinale (ginger): 122015553
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Entry
122015553 CDS
T08725
Name
(RefSeq) probable auxin efflux carrier component 1b
KO
K13947
auxin efflux carrier family protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122015553
Transporters [BR:
zof02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
122015553
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Gene cluster
GFIT
Motif
Pfam:
Mem_trans
Motif
Other DBs
NCBI-GeneID:
122015553
NCBI-ProteinID:
XP_042428449
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Position
8B:3864361..3867879
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AA seq
600 aa
AA seq
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MISAVDLYHVLTAVVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS
TNDPYAMNYRFIAADTLQKLIVLAVLAAWAKLSARGCLEWTITLFSLATLPNTLVMGIPL
LKGMYGAESGSLMVQIVVLQCIIWYTLMLFLFEYRGAKLLIMEQFPDTAGSIISFHVDSD
IISLDGKEPLQAQAELGDDGKLHVTVRKSTSSRSEAYSRRSLGGLNSGGISVTPRPSNLS
NAEIYSLQSSRNPTPRGSSFNHADFYSMVRNGNSGTASSLSPRHSNFGGATFDVETGPRG
NGAAAAYPAPPTTGMFSPVKKANGAEGGRDLHMFVWSSSASPVSEGGMHVFGGTEFRNEH
GVAQQDDNRHKVLEANRDAYDLCRRDDFSFGNKPIGQGMDQMKKVGQSLANVGTNSTELH
SKTGADEVAKTSMPPASVMTRLILIMVWRKLIRNPNTYSSLIGVIWSLVSFRYNIEMPAI
IAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLAAFAMAVRFVTGPAVMAAASIAV
GLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgatatcggcggtggacctttaccacgtgctaacggcggtggtgccgctgtacgtggcg
atgatcctggcgtacgggtcggtgaagtggtggcgcatctttactccggaccagtgctcg
ggaatcaaccgcttcgtggcgctcttcgcggtgccgctgctctccttccatttcatctcg
accaacgacccctacgccatgaactaccgtttcattgcggcagacacgctgcagaagctg
atcgtgctggcggtgctcgcggcgtgggcgaagttgagcgcccgcggctgcctcgagtgg
accatcaccctcttctcccttgctacgcttccgaatacgctggtgatgggcatccccctg
ctcaagggcatgtacggggccgaatccggtagcctcatggtccagattgtggtgcttcag
tgcatcatctggtacaccctcatgctcttcctcttcgagtacagaggcgccaagctcctc
atcatggagcagttcccggacaccgccggctccatcatctccttccatgtcgactccgac
atcatctccctcgacggtaaggagccgttgcaggcccaggcggagcttggcgacgatggg
aagctccacgtgacggtgcgcaagtcgacaagctcgcgctccgaggcctactcgcggcgc
tctctcggtgggctcaactccggcggcatctccgtcacgccacgcccctccaacctttcc
aacgccgagatttactcgctgcagtcatcgcggaacccgacgccgaggggctccagcttc
aaccacgccgacttctactctatggtcaggaacggcaacagcggcacggcgagcagcttg
agcccgcggcactctaacttcggtggcgcaacattcgacgtggagacagggcccaggggt
aacggcgcggctgcagcctaccctgctccacctaccaccggaatgttctcgccggtgaag
aaggctaatggggcagaaggagggagggatttgcacatgttcgtgtggagttcgagcgcg
tcacctgtttcggaaggagggatgcatgtgttcggagggacagagttcaggaacgaacat
ggagttgcgcagcaagatgataaccgccacaaagtcctagaagccaatcgcgacgcctat
gatttgtgccgacgggatgacttcagcttcggcaataaacccattggccagggaatggat
caaatgaagaaggttggccagagccttgccaatgtcggcacaaattcaacagagctccac
tctaaaacgggggctgatgaagtcgcaaagacctcgatgccgcctgcgagtgtgatgacc
agacttatattgatcatggtgtggcgaaaactaatccggaatcctaacacctactcgagc
cttattggtgttatctggtctctcgtctccttcaggtacaatattgaaatgcctgctatt
attgcaaaatcaatctcaatactttctgatgcgggacttgggatggccatgttcagtctc
ggtttatttatggcattacagccgagaattatagcttgtggcaattcccttgctgcattt
gctatggctgtaagatttgtcactggtcctgctgtcatggctgctgcttctattgcagtt
gggttgcgaggagttctcttacacgttgcgatagtacaggcagctcttccccaagggatt
gtgccttttgtgtttgcaaaagagtacaatgtgcatcctgatattttaagcacaggggtt
atatttgggatgctgattgctcttcctatcactttagtttactacatattactgggactt
tga
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