Zingiber officinale (ginger): 122015629
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Entry
122015629 CDS
T08725
Name
(RefSeq) SKP1-like protein 1
KO
K03094
S-phase kinase-associated protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122015629
04120 Ubiquitin mediated proteolysis
122015629
09126 Chromosome
03083 Polycomb repressive complex
122015629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122015629
04121 Ubiquitin system [BR:
zof04121
]
122015629
03036 Chromosome and associated proteins [BR:
zof03036
]
122015629
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
122015629
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
122015629
Cul7 complex
122015629
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122015629
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
122015629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
122015629
NCBI-ProteinID:
XP_042428554
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All DBs
Position
8B:10512618..10516267
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AA seq
161 aa
AA seq
DB search
MAKTITLRSSDGEVFEVDEVVAMESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK
HVDATSAAASKSSDDASRLADEELKSWDGEFVKVDQATLFDLILAANYLNIKGLLDLTCQ
TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacgatcacgctgaggagctccgacggtgaggtattcgaggtcgacgaggtg
gtcgctatggaatcgcagaccatcaagcacatgatcgaggacgactgcgccgacaacggc
atccctcttccaaacgtcacctccaagatcctttccaaagtcatcgagtattgcaaaaag
cacgtcgacgccacctcggccgctgcttcgaagtcatctgatgacgcctcccggctcgct
gacgaagaactcaagtcatgggatggagagtttgtcaaggtcgatcaggcgaccctattc
gatctcatactggctgcaaactacctgaatataaaagggcttctggatttgacttgtcaa
actgtggccgatatgataaagggaaagacccctgaagaaatccgcaaaacattcaacatc
aaaaatgactttactccagaggaagaggaagaggtccgaagggaaaatcaatgggccttc
gaatga
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