Zingiber officinale (ginger): 122015646
Help
Entry
122015646 CDS
T08725
Name
(RefSeq) tryptophan synthase alpha chain-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00260
Glycine, serine and threonine metabolism
zof00400
Phenylalanine, tyrosine and tryptophan biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01230
Biosynthesis of amino acids
Module
zof_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122015646
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
122015646
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
122015646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
ThiG
NanE
BtpA
Motif
Other DBs
NCBI-GeneID:
122015646
NCBI-ProteinID:
XP_042428578
LinkDB
All DBs
Position
8B:39578898..39580723
Genome browser
AA seq
344 aa
AA seq
DB search
MASATMIVAGNRLKLSSSTSTFYSVPRILHPKSSLRLRAQASSIAETFSALKRQEKVAFI
PYITAGDPDLSTTAKALKMLSRCGADLIELGLPFSDPVLDGPVIQASHKRALANKTSPKA
VISMLKEVVPQISCPIVVFSYYNMILSYKSEWFLAALEDAGAQGLIVPDLPFEESATLRE
EALKKNIDMVLLTTPTTPRKKMEAIADASGGFLYLVSSAGVTGARPTVNSQVQYLLRDIK
RASEKPVAVGFGVSKPQHVRQICSWGADGVIVGSAIVRLLGEAEFAEEGLRQMKSFVECL
TAALPSRNPALEKSTTPNFFREDEFWGRRAAPQPKSTVLVHRRR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcaactatgattgttgctggcaacagattgaagctttcttcttctacttcc
acattctactctgttccaaggatcctacatccaaaatcttctctcaggctcagagctcaa
gcatcaagcatcgctgaaaccttctccgccttgaaaagacaggaaaaggttgcgtttatt
ccgtacatcactgctggagatcctgatctatcaacgacagcaaaggctttgaagatgctg
agccgctgtggtgctgatctgattgagttggggctgccattcagtgaccctgtgctggat
ggaccggtcattcaggcatcccataagagggcgttggctaacaagaccagtcccaaggca
gtcatctccatgttgaaggaggtcgtcccacagatctcttgcccaattgtggtattctcc
tactacaatatgatattaagctacaagagcgaatggttcttggctgcactggaagatgct
ggtgcacaagggcttattgtgccagaccttcctttcgaagagagtgccactctgagggaa
gaagctcttaagaaaaacattgatatggttctgctcaccacacctaccactccaaggaag
aaaatggaggccattgcggatgcttcaggaggattcctgtaccttgtaagctcggctgga
gttactggtgctcgtcctacggtgaacagccaagtgcagtatcttctcagggatatcaaa
agggcatccgagaagcctgttgcagtagggtttggagtatcaaaaccacagcacgtccga
cagatctgttcgtggggagccgacggagtgatcgttggcagcgcaatcgttagactgttg
ggcgaagccgagtttgcagaggaaggattaaggcagatgaaatccttcgtggagtgtcta
acagctgcgcttccttcaagaaaccctgcgctggaaaagagcacaactccgaacttcttc
cgagaggatgagttttgggggaggagagctgcgcctcaaccaaagtcaaccgtactagtg
caccgacggcgttga
DBGET
integrated database retrieval system
