Zingiber officinale (ginger): 122015708
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Entry
122015708 CDS
T08725
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122015708
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122015708
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122015708
03029 Mitochondrial biogenesis [BR:
zof03029
]
122015708
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
122015708
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122015708
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122015708
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122015708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
122015708
NCBI-ProteinID:
XP_042428662
LinkDB
All DBs
Position
8B:1868174..1872976
Genome browser
AA seq
726 aa
AA seq
DB search
MRFALLASAVSKSFVPTKTLRRLHLSSASSSPMAASEESLRLALAEKQATVDAQAEAVRA
LKARPGAVKPEIDAAVECLKALKVEAGAAARQLQAAVSRNGNASAACSREAFRQAVVNTL
ERRLFYIPSFKIYRGVAGLYDYGPPGCAVKSNVLTFWRQHFVLEENMLEVDCPCVTPEVV
LKASGHVDKFTDLMVKDEKTGTCYRADHLLKDYCKQKLEKDLALSAEQAAELKHVLAMLD
DFSAEELGAKLKDYGITAPDTKNTLSDPYPFNLMFQTSIGPSGILPGYMRPETAQGIFVN
FKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHSKFID
VANLEFLMFPRREQMAGESAIPIILGEAVSKGIVNNETLGYFIGRVYLFLTRLGIDKERL
RFRQHLPNEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHSEKSGVPLVAHEKFS
EPREIEKLVIVPSKKELGLSFKGNQKMVVEALEAMNEKEALEMKASLESKGEVEFYVCTL
GKAVVITKKMVAISIEKKKEHQRVFTPSVIEPSFGIGRIIYCLFEHSFYTRPSKSVEEQL
NVFRFPPLVAPIKCTVFPLIKTAKFDDVAKIIAKSLTAAGVSHIIDITGTSIGKRYARTD
EIGVPFAVTVDSTDSVTIRERDSKEQIRVSIDEVASVVKEVADGQSTWSDITGRYPAHVA
AQSNEE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcgcattactcgcctccgctgtttctaagtccttcgtcccgaccaaaaccctc
cgccgcctccacctctcctccgcatcctcctctcccatggctgcctccgaggaatcgctc
cgattagcgcttgctgagaagcaggccactgtcgatgcccaggccgaggccgtacgcgcc
ctcaaggcccgccccggcgccgtcaagcccgaaatcgacgccgctgtcgaatgcctcaag
gccctcaaggtggaggccggagccgccgccagacagctccaagccgctgtcagtagaaat
ggcaacgcgtccgccgcctgcagcagggaggcgttccgccaggctgttgtcaacacgctc
gaaagacggctcttttacatcccctccttcaagatctatcgcggcgtcgctggcctttat
gactacggccctcctggctgcgccgttaagtctaacgtgctcaccttctggcgccagcat
tttgtccttgaggagaatatgttggaggttgactgcccctgtgtcacgcctgaagttgtt
cttaaggcatctggacatgttgataagttcactgatctaatggtaaaggatgagaaaaca
ggcacatgttatcgagctgaccacttactcaaggactactgcaaacagaagctcgagaag
gatctcgcattatcagctgagcaggctgcagagcttaagcatgttctagcaatgttagac
gatttctctgcagaggaattaggtgcgaagcttaaagattatgggatcacagcaccagac
accaaaaacacactttctgatccttacccctttaatctcatgtttcagacttccattggc
ccatctggtattttgcccggatatatgaggccagaaactgctcaagggatctttgtgaac
ttcaaggatttgtactattataatggtaacaaacttccatttgcagcagctcagattggt
caagcatttagaaatgagatttcacctcggcaaggtcttctcagagtccgtgaatttaca
ttagcagagattgagcattttgtggatccagaagacaagtcacattcaaaattcattgat
gttgccaacttggagtttttgatgttccctagaagggagcaaatggcaggggagtcagca
atacccattatacttggcgaggcagtttccaagggaattgtcaacaatgaaacacttggc
tactttattgggagggtgtacctctttctaacacgccttggaatcgataaagaacgatta
cgtttcaggcagcatttgccaaatgagatggctcactatgcagctgactgttgggatgca
gagatcgaatgttcttatggctggattgaatgtgttggaattgctgatagatctgcatat
gatttacgggctcattcggaaaaaagtggtgtccctttggttgctcatgaaaaattctca
gaacctagagaaatagagaaacttgttattgtgccatcaaaaaaagaacttggtctctca
tttaaaggcaaccaaaagatggtggtcgaagcactggaggctatgaatgaaaaggaagca
ctggaaatgaaagcttctttggaatctaaaggcgaggtagagttctatgtttgtactctg
gggaaagctgttgtcataacaaagaaaatggtcgcaattagcattgaaaagaagaaggaa
catcaaagggttttcacaccctctgttattgagccatcttttggtattggccggataata
tattgtctttttgagcattctttctacacacggccaagcaaatcagtggaggaacaacta
aatgtcttccgttttcctcctctagtggcacccatcaaatgcactgttttcccactaatt
aaaactgcaaaatttgatgatgtcgctaaaatcatagcaaaatctttgacagcagctggg
gtttctcatattattgacatcacaggcacatctatcggaaagcggtatgccaggaccgat
gaaattggcgtaccttttgcagtaactgttgattcaactgatagtgtgacgatccgggaa
agggatagcaaggagcagatccgtgttagcatcgacgaggtggcatcggtggtgaaggaa
gtggcagatgggcaaagcacctggtctgatattacggggaggtatccagcccatgtcgcc
gcgcaatccaatgaggaatga
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