Zingiber officinale (ginger): 122015711
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Entry
122015711 CDS
T08725
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122015711
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
Others
122015711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
BCAS3_WD40
Beta-prop_Vps41
WDR55
Beta-prop_HPS5
DUF7099
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
CPSF_A
Beta-prop_TEP1_2nd
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
122015711
NCBI-ProteinID:
XP_042428664
LinkDB
All DBs
Position
8B:complement(97353588..97362004)
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AA seq
451 aa
AA seq
DB search
MAALSIPPPPPSSTTSSVASIPWPNPVADPDSSSLAPSLADDPNPFPPPVVDHAEEEPHA
GNSMKDDESSEDLASAAPLPPHPVPAASSSSPPRVAESDAADAISVLHLSFNQDHGCFAV
GTDRGFRIYNCDPFREIFRRDFDGRGIGVVEMLFRCNILAVIGGGPNPNYPPTKVMIWDD
HQSRCIGELSFRSEVRAVRLRRDKIIVVLDNKIFVYNFADLKLMHQIETVPNPKGLCAVS
QQQGSLVLVCPGGQKGQVRVEHYGARRTKFIMAHDSRIACFALSQDGRLIATSSSKGTLI
RIFSTIDGTLLQEVRRGADRAEIYSLAFSSDMQWLAVSSDKGTVHVFSLKVNLGLTANDK
PRPASDPNAPTQSSHLSFIKGVLPKYFHSEWSVAQFRLHENTQYIVAFGHQKNTVVILGM
DGSFFRCQFDPVAGGEMTQLVCYNFLKSESF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctctcgatccctcctcctccgccttcctccaccacctcctctgttgcttct
atcccatggccgaatcccgtagctgaccccgattcgtcttcgctagccccttctctggcg
gacgatcccaatcccttcccgcccccggtggtcgaccacgcggaggaggagccccacgca
ggaaattccatgaaagatgatgaatcttccgaggatttggcctccgcagccccgctcccg
ccgcatccggtccccgcggcttcgtcctcctcgccgcctagggtagcagaaagcgatgcc
gcggatgcgatatcggttctccacttgtcttttaaccaggatcatggatgcttcgccgtc
ggcaccgatagggggttccggatctataactgtgaccctttccgagagatcttccgcagg
gactttgatggtaggggcatcggcgtggttgagatgctttttcggtgcaacatcctcgcc
gtcattggcggcgggccgaacccaaactacccgcctactaaggtcatgatctgggatgat
caccagagccggtgcatcggagagctttctttccggtcggaggtccgtgccgtccggctc
cggagggacaagattattgtggtgctcgacaacaagatattcgtctataatttcgcggac
cttaaattgatgcatcagattgagactgtgcccaatcccaaggggctgtgcgctgtttca
cagcaacaggggtcgcttgtgcttgtctgcccaggtggtcagaaggggcaggtcagggtg
gagcactatggggcgaggcgaacgaagttcattatggcacacgattcaagaatagcttgt
tttgctctgtcgcaggatggaagattgattgcaacttcaagctctaagggcacgcttatt
aggatatttagcacaattgatggtactctccttcaagaagtaagaagaggtgctgataga
gcagagatatacagtttggctttctcttctgacatgcagtggttagctgtctcaagcgac
aagggaactgttcatgttttcagcctcaaggttaatcttggattgacagcaaatgataaa
cctcgccctgcatcagatccaaatgcaccaacacaaagttctcatctttctttcatcaaa
ggtgtattgccgaaatacttccattccgaatggtcggtggcacaattccggttgcatgaa
aatacacaatacattgtggcatttggtcatcaaaagaatactgttgtcattcttggtatg
gatggaagtttctttcgatgccaattcgatccagtggcgggtggggaaatgacacaattg
gtatgctataacttcctaaagtcagaatcattctaa
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