KEGG   Zingiber officinale (ginger): 122015733
Entry
122015733         CDS       T08725                                 
Name
(RefSeq) transportin MOS14-like
  KO
K15436  transportin-3
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03013  Nucleocytoplasmic transport
zof03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122015733
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122015733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:zof03016]
    122015733
Transfer RNA biogenesis [BR:zof03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    122015733
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_3rd IBN_N Importin_rep_3 PH_SSH1-like_1st CRM1_C
Other DBs
NCBI-GeneID: 122015733
NCBI-ProteinID: XP_042428685
LinkDB
Position
8B:complement(18823349..18851480)
AA seq 959 aa
MELQNTVKEALTALYHHPDDGIRARADRWLQDFQRTIDAWQVSDNLLHDSSSNIETLVFC
SQTLRSKVQRDFEELPSEAFCPLRDSLYTLLKKFGKGPPKVRTQICIAVAALAAHVSISD
WGDGGILNWLSNEMRSNTEYIRSFLELLVVLPEEACNYRIAARPERRRQFDKELTSSSEV
ALSLLTSCLGFDYLKEQILEGFTSWIRMCHGITASTLASHPLVHAALSSLKSEQFVEAAV
NATSELIRFTVSRSSGDISAQSPLIHVIVPQVMSLREQLLDSSKDEEDVKAIARLFAEMG
DSYVDLIATGSDNSMLIVQALLEVASHPEYDISSMTYNFWHNLQNILSRRESCVSHGSEA
SIEVERNRRLQVFRAPFEMLVSLVTFRVEYPKDYEELSEEDCKDFRHIRYVVSDVLVDAT
VILGGEQTLKLLFTKLVQAVGSHRNEDSFNWRPVEAALFCIQAVAKSVSTQEAEVLPQIM
TLLPKLPCESHLLLTVCSTVGAYSKWIDVAPVELSILPPLVGILTKGMSASEDCAAAAAV
AFKYICEDCSNKFVGSLDGLFHIYHIAVSGDGGYKVSSDDSMHLVEALSVVIKELPLDHA
KKALELVCVPIITPLQEFINQGELMNEVPARHLTIHIDRLACIFRNVTLPEIVAEAINRF
WPILKSIFDNRGWDLRTMESLCRACKYAVRTCGRFMVITIGSMLEEVQLLYQQHNQSCFL
YLSSEVIKMFGSDPSCANYLRSLIEALFIHTTKLLRTIQDFTARPDIADDCFLLASRCIR
YCPDLFVPSSSFLSLIDCSMIGITIQHRDACKSILNFLSDVFDLANSSAGEVYRPIINNI
LVPRGATLTRILIASLAGALPSSRLEEVTYVLLSLTRTYGVKVLVWAKESISLVPHTALT
EAECSSFLKTLSEVASGSDSSALANTLEELSDVCRRNRAVQDIVQGALRPLDLNFTTVS
NT seq 2880 nt   +upstreamnt  +downstreamnt
atggaactacagaacacggtgaaagaggcattgaccgctctctaccatcacccagacgac
ggcatccgcgcccgtgctgatcggtggctccaggacttccagcgcaccatcgacgcctgg
caggtctctgataacttacttcatgactccagcagtaatattgaaacattggtattttgt
tctcagactcttaggagcaaggtacaaagagattttgaagagctaccatctgaagccttt
tgtcctctacgtgattcattatatacattgcttaagaaattcggtaagggcccacctaag
gtcagaactcagatttgtattgcggttgctgctctggctgcacatgtatctataagtgac
tggggagatggtggcattctcaattggctaagcaatgaaatgcgatcaaatactgagtac
atcagaagtttccttgagctacttgtggtcttacctgaggaagcttgtaactataggata
gctgcacgtccagaacgacgtcgtcaatttgacaaggaacttacgtcatcatctgaagtt
gctctcagtttgttgacttcttgtttgggttttgattatttaaaagagcagattttagag
ggttttacttcatggattcgaatgtgccatgggattacagcatctacacttgcttctcat
cctctagtacatgcagctttgtcaagtttaaaatccgagcaatttgtggaggcagctgta
aatgctacatcggaattgatacgtttcactgtttctagaagttctggtgacatttctgct
caatcgccgctaattcatgttattgtgcctcaagtaatgagcctgagagagcaacttcta
gattcttctaaggatgaagaagatgtgaaggctattgcacgcttgtttgctgaaatgggg
gattcttatgtggatttgattgcaactggttctgataattcaatgcttattgtacaagca
ttgcttgaagttgcatcgcatcctgaatatgacatatcgtcaatgacatataatttctgg
cacaacctccagaatatcttgtccagaagggagtcttgtgtttcacatggatctgaggct
tcaattgaggttgaaaggaacaggaggttacaagtttttcgtgcaccatttgagatgctg
gtttccctggtcaccttccgagttgaatatccaaaagattatgaggagctctctgaagaa
gattgcaaggattttaggcatatcagatatgttgttagtgatgtactagttgatgctaca
gtcattttgggaggtgagcagacacttaagcttctattcacaaagctagttcaggctgtt
ggaagtcacagaaatgaggatagcttcaattggcgtccagtggaggctgctctattctgt
atacaagcagtagccaagtcagtctcaactcaggaagcagaagtgttgccccagattatg
acactgcttccaaaacttccttgtgaatcacatttgctactgacagtttgttctactgtt
ggagcatattcaaaatggattgatgtggctccagttgaattatcaatattgccaccacta
gttggtattctgactaaaggaatgagtgcgtcagaggattgtgcagcagctgctgctgtt
gcatttaagtatatatgtgaagattgtagcaataaatttgttggatcattggatggcctt
ttccatatttaccatattgctgttagcggagacggaggatacaaagtttcttctgatgat
tctatgcatttggttgaagcattgagcgtggttatcaaggaacttccacttgatcatgcc
aagaaagcattggagttggtttgcgtgccaattattactcctttacaagagttcatcaat
caaggagaattgatgaatgaggtaccagcacgtcatcttacaattcatattgacagacta
gcatgcattttcaggaatgttactcttccggaaattgtagctgaagccatcaaccgcttt
tggccaattttgaaatctatctttgataatcgtggctgggacttgagaacaatggagtct
ttatgccgggcctgtaaatatgctgtgcgaacctgtggaagatttatggtgattaccata
ggttctatgctggaagaggtccaactcttgtatcaacaacataatcaatcttgcttcctt
tatttatcaagtgaagtcataaagatgtttggatcagatccctcttgtgctaattatctt
agaagtttaattgaggccctttttatacatacaaccaagcttctcaggacgatacaggac
ttcactgctagaccagacattgcagatgactgttttttgttagcttcaagatgcatacga
tattgcccagatttgtttgtcccttcttcttcatttttatcgctgattgactgctcgatg
attggaatcactatacaacacagggatgcttgcaagtccatattgaactttttgtcagat
gtctttgatcttgcaaactcctctgctggagaagtctaccgccctataatcaataatatt
ttagttcctcgtggtgctactcttacccgtattttaattgcatctttagctggagcgctt
ccatcttctcgattggaggaggttacatatgtactgttgtccttaactaggacatacggt
gtcaaggtgttagtgtgggcaaaagagagcatatcacttgttccccatacagcgctcaca
gaggctgaatgttcaagttttctgaaaactctatcagaagttgcatctggatcagatagt
tctgcccttgccaacacacttgaagagctttcagatgtttgccgtcgcaatagggcagtt
caagatatcgtccaaggagctctaagaccactcgacttgaactttacaactgtgtcctag

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