Zingiber officinale (ginger): 122015844
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Entry
122015844 CDS
T08725
Name
(RefSeq) protein HASTY 1-like isoform X1
KO
K14289
exportin-5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122015844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122015844
03036 Chromosome and associated proteins [BR:
zof03036
]
122015844
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122015844
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
122015844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
122015844
NCBI-ProteinID:
XP_042428840
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All DBs
Position
8B:complement(56876940..56892923)
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AA seq
1203 aa
AA seq
DB search
MDDCSSTAATVAQAIAAALDWNSPPDSRKAAVAYLESVKSGNVRTLASTSLLLVRSDWTS
EIRLHGFKMLQHLVRYRWDEFNITERREFANLTISIISEVVNHQEEWALKSQTAALVAEV
VRREGVALWHELLPTLVSLSAKGPIEAELVAMVLRWLPEDITVHNEDLEGDRRRVLLRGL
TESLAEILPLLYTLLEKHFGAALREFMAQQLDAAKQHTTAVIASLNAVNAYTEWAPVPDL
AKYGLIHGCGCILPYNEFRLHACEFFKFLSQRKRPTDNTAVEFDSAMMSVFQILMNISRD
FFNKSKSNFSAIDETEIEFMESICECMVTLASSNVQCITGDGAMTSQFLQQMLEYYQHVK
FALHYQSLLFWLVIMREPVSKGKSSGHSLGENFVGNLGIASKPSDKEKIIMSVLVNDDIC
AAILDISFLRMLKKNPSAGNLSTQNDFELWDDEFDSKTDFSQYRSRLLELIKLIAVQKPL
LAATRVSERITMIFKNCAHASVSAQELAMLESAQMGLETVASAIFDGSVEFVNIVAESKL
QLHSTFEGLLQHFLSLRWTEPALAVILCRYLDSLGPYFKYYSDTIASVVNRLFELLTSLP
IAIKDPSLNNTRHARLQICTSFIRIAKAAGRSLLPHMKGIADTMAYLQGEGRLLRGEHNI
LGEAFLVMAASSGIQQHQEVLAWLLEPLSKQWTQSEWQNAFLSDPAGLTRLFSDPQFMWS
IYHNVTFFEKALKRSGVKKPAMNLQGSSEATDASTHPYAMSSHLSWMLPPLLRLLRCIHS
LWSPPISEALPAEIRAAKAMSHAEKASLLGESTKLLKDLSTSGDGRQADTIREEELSEND
LRNWLKGIRDSGYNVVGLSTTVGDTFFKCLESHSVALALTDNVQSMEFRHLRLLIHSVII
PLVKFCPPNLWELWLENILHPLLIHCQQTLACSWSSLLCEGRVKVPDCFGNLSGLELKVE
VMEEKLLRDLTREVCSLLSTLASPPLNTGLPSLEQLGPGNRVDSLKDLNAFASNSLVAFL
MTRQGLALHSLRIGINALAWTDGDSVNKVIPFCGLIIVLAIITSSVELREIVSKDLFLAL
IQALSLESNAMISSDLLGLCREIYVYLADRDPAPRQVMLSLPSITSNDLLAFDDALIKTS
SPKEQKQLLKGLLLSATGNKLRALAALRTTNIITNVTARARSSASNSGHNTEEDGTIGLA
AIT
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacgactgcagcagcacggccgccaccgtcgcccaagccatcgccgccgcactggat
tggaactctccccccgattcccgcaaggccgctgtcgcctacttggaatccgtcaagagt
gggaatgttcgaactttggctagcacatctcttctcctagttcgaagtgattggacctct
gagattcgactacatgggtttaagatgttgcagcatttggttcgatatagatgggatgag
ttcaacattacagaaaggagagagtttgcaaaccttacaattagtataatctcagaggtg
gtgaaccatcaggaggaatgggcattgaagagtcaaacagctgctttagttgctgaggtt
gtgcgacgagaaggagtagcactttggcatgaacttctaccaactctggtttctctatca
gccaaaggtcccattgaggctgagttagttgccatggtgctgaggtggcttcctgaagac
atcacagttcataatgaagacctagaaggtgacaggagaagagtattgttgcgtgggctt
actgaatcattggctgaaattttaccactattatacactttgcttgagaaacattttgga
gctgctttgagagagttcatggcacaacaattagatgctgcaaaacaacacacaactgca
gtaatagcttctctgaatgctgtaaatgcgtatactgaatgggctcctgtgcctgatctt
gcaaaatatggtttgatccatgggtgtggatgcatattgccttataatgaatttcgcctc
catgcttgtgagttttttaaattcctttctcaaaggaaaaggcccactgataatacagct
gtggagtttgattctgcaatgatgtctgtcttccaaattttaatgaacatttcaagagat
tttttcaataaatctaagtcaaactttagtgcaattgatgaaactgagattgagtttatg
gaatctatatgtgagtgtatggtaactttagcttcttccaatgtgcaatgtattactggt
gatggagcaatgacttctcaatttcttcaacagatgctggagtattaccaacatgtaaag
tttgccctccattatcaatccttgctcttttggctcgtaataatgagagaacctgtttca
aaggggaaaagttctggacatagtttgggtgaaaattttgttggcaatttgggaattgcc
tccaaaccctccgataaagagaagattatcatgtcagtccttgtcaatgatgacatttgt
gcagctatcttggatatttctttcctgagaatgttgaagaaaaatccatctgcaggcaat
ctatctactcagaatgactttgaactatgggatgatgagtttgattcaaaaactgacttc
agtcagtatcgctctaggctgctggagcttattaaacttattgctgttcaaaagccattg
cttgctgcaacaagagtttcagagagaattactatgatttttaaaaattgtgctcatgct
tctgtgtcagctcaggaattagcaatgctagagagtgctcaaatgggacttgaaacagtt
gccagtgcgatatttgatggctcagttgaatttgtgaatattgttgctgagtccaagttg
caattacacagtacgtttgaaggtcttcttcaacatttcctttccttaagatggactgaa
ccagcacttgcagtaattctctgtagatacttggattcgttgggaccttatttcaaatat
tattccgacacaattgctagtgttgttaataggctttttgagctgctaacatcacttcct
attgcaatcaaggatccttctttgaataatactcgacatgctagactgcaaatttgtaca
tcatttatccgcatcgccaaagctgctgggagaagtcttcttcctcatatgaagggcatt
gctgacaccatggcctatcttcaaggagaaggtcggttgctgcggggtgagcataatatt
ttaggcgaagcatttcttgttatggcagcttcttctgggattcaacaacatcaggaagta
ttagcctggttgcttgaacctttgagcaagcaatggacccagtcagagtggcaaaatgca
tttttatctgatccagctggtctaacccgattgttctctgatcctcaatttatgtggtca
atttaccataacgtgaccttttttgagaaggcactcaaaagaagtggagttaagaagcct
gccatgaatctacagggaagttcagaagccactgatgcatctactcatccatatgctatg
tcttctcatttgtcatggatgctgcctcctctcttgaggttgttacgatgcatacattct
ctatggtctccaccaataagtgaagctttgccagcagaaattagagcagcaaaggctatg
agtcatgctgagaaggctagccttcttggcgaaagcactaaattgctaaaagatctgtct
acttcaggagatggacgccaggctgacacaataagagaagaagagttaagtgaaaatgac
ttgagaaattggctaaagggaatcagggacagtggctacaatgtagtaggactttcgaca
accgttggcgacacattctttaaatgcttggagagtcattctgttgcattagctctaaca
gataatgtacaatcaatggagtttagacatctacgactacttatccactcagtcatcatt
cctttggtgaaattctgtcctccaaacttatgggagctttggctagaaaatatcttacac
cctttactgatccactgccagcaaacccttgcttgttcatggtccagtcttttatgcgaa
ggtagggtaaaggttcctgattgctttggcaatctttctggtctggagctgaaggtggaa
gtgatggaggaaaagttgctccgtgacttgactcgagaagtgtgttcacttctctcgact
ttggcttcaccacctctgaacactgggcttccttctttagagcagcttggacctggtaat
cgtgttgattcacttaaagatttgaatgcctttgcctcaaattctttggtcgccttcctc
atgactcgccaaggtctcgctctgcactcattgagaataggcataaacgcattggcatgg
accgatggcgattctgtgaataaagttatccctttctgtgggttgattattgttcttgct
attataacaagcagtgtggaacttagagagattgtctccaaggatttgttccttgcttta
attcaagctttatcacttgagtccaatgccatgattagctcggacctccttggattgtgt
cgtgaaatatatgtatatctggcagatagagatcctgcaccacgccaggttatgttgagc
ctcccttctatcacaagcaatgatttgcttgcttttgatgatgctctgatcaaaactagt
agccctaaagaacaaaagcaactccttaagggcttgcttctatcagctactggaaataaa
ttgagagctcttgctgccctaaggaccacaaacatcataacaaacgttacagctagagca
aggagttcagcttcaaactctggacacaacactgaggaagatggcaccattggcttggca
gcaataacttga
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integrated database retrieval system
