Zingiber officinale (ginger): 122015905
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Entry
122015905 CDS
T08725
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122015905
03012 Translation factors [BR:
zof03012
]
122015905
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122015905
mRNA cycle factors
Stress granule specific factors
122015905
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
eIF-4
122015905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
122015905
NCBI-ProteinID:
XP_042428927
LinkDB
All DBs
Position
8B:complement(99982893..99992701)
Genome browser
AA seq
1864 aa
AA seq
DB search
MSVNQSRAGRAEAQHRKPVRSVSAGQPKGLVGSGGGLNGDDSAPQPAIHSSSSYAASPSS
VAPSLPTNRSFKKSGNEQGNQSGINASSSESSGAAIFHQNLVQNGAHPQIRSPVLSGYSE
SPSPSPAATKPFIPRAPSQSASSSAPMPLPKGDASKTFTLQFGSINPGVMGGLQFPARTS
SAPPNLDEQNHNQAHTKSMRVVPSISVPQIKRDVSVPAPSATYVSALNSSGPPISRMPSP
LHTQFQPQQTQILPKFGVPNVQMHQPGFAANSLQMAMTLPMGNSPQVPQQILVPSIQPHF
VQQQAMMHQGQALGFARSIGQLLPPQLGNMRIGISPQFAQQQPVKYGGARKTTVKITHPD
THEELRLDKNTDLGKDGDLAGQRPQPNVIPQPHSIPTYTHQTNFSPMQQNSYSHSQHIFP
NSVPLGSGQMPTNSQAPRYNYPLNQIGLNLNFLDSSAINHIPSGKSLSTPLHGISEGLKL
EALSVSASLPSSGQVTLRPPVGSKTVKTGASLSSPSVVITMPSTKVEPQMPVKTTADDTA
LNERRAETNPGGSSQQIKLTSSSSVSMSVPVTDINTTIPLNSRLFMLSEASLSPETPNRE
SGSLLDGNHGEKNEHAQRCDTSKDNHGKTSKKDFRNTQQNHQLDASSKGEKVAPKCENRT
LTETEVAEPVVDKVMPAASGSFPEISGKEASLDASVGYGNLSSAAPDVLSNKENLSSHAS
TSLDHVVGGIPTYCLTVNLRVGSTALAVGREKRSELTENESSEAANDSLEDFSKAKVHSS
SAVAIPSEFENITLLKQDDKQEKCLKGKSIKYDEVESELLNSSGGDFAVLQESKTQNQQI
TSTDASLNSTGSDTAVDCDILGARDAKDNLNTFSSKLKLKPIKDGLIDCSGARMETVLVP
IPSVSVEHKQGAKVDLPSDRLTSSTILGQKNKPLLENTKPKVTAGKKKNRREIFSKADAA
CASDLYTAYKGPEVNHEVVLKSESSNSPTAAANITPIGCPTKDVVSSDEDLQNKAELDDW
ENAVDISTPKLKTLKHGQDAGEARKQRDGDVCKATTWKYSRDFLMTLSQHFTQLPVDFDK
SSDILDVLLIFSQGKSPLQSPRRINDRPSSRGDCRPVGLLDDDKWTKSHASFGRDGNATI
NLRPGQGGSHVVLRDLPRQASGQLGGILSGPMQSPSSQGGTQRGNLDAADRWQRARGLIP
SSQTPLQIMHQAEKKYVVGKVSDEEEAKQRQLKAILNKLTPQNFEKLFTLVEEVNIDNLV
TLTGIISQIFDKALMEPTFCEMYANFCFHLASALPDFSEANEKITFKRLLLNKCQEEFER
GEKEQAEANNVEEEGEVKQSKEERDAKRLQVRRRMLGNIRLIGELYKKKMLTERIMHECI
KKLLGQYQNPDEEDIEALCKLMSTIGEMIDHPKAKEHMDVYFDMMAKLSTSQQLSSRVRF
MLKDAIDLRKNKWQHRRKIEGPKKIDEVHRDAVQERQAQSSRLSRGPVNSSVPRRGQAAD
YGSRGSAPLSSSSYQQVGGHRALPLQVRGYGIQDPQLEDRPQFEGRNTSLPLQHRSNDDD
SISLGPQGGLARGMSVRGHPSISHAPPPEISPNAGEQHRLSSGTNTIYTVERSPGVTYDQ
LSHRDWNNQYCSGDVKISDHTFERSTTSDLPGGQLYGNSRSCLTAVSGTKAFSEDVLREK
SISAIREFYSAKDEKEVALCIKELNAPSFYPSMISIWVTDSFERNSNERDLLVKLIINLC
KSRDCLLSQSQLLQGFGSVLASLEDAVNDAPRAAEFLGCIFAKTILEDVAALREIARLIL
EGGEEPGQLREVGLAAEVLGNIFETIKLERGDSILNEIRVSSNLRFDDFLPPSPLKAKKL
DAFL
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaaccaatccagggcagggagggcggaggcgcagcataggaaacccgttcga
tcggtaagtgctggtcagccaaagggattagtcggcagcggcggtggcttgaatggcgac
gattccgccccacagccagctatccactcgtcctcatcctatgctgcttctccttcgtcg
gttgcgccgtcattgccgactaatcgaagcttcaagaaatcaggtaatgagcaaggcaat
cagtctggaataaatgcatcaagctctgaatcaagcggtgctgccattttccatcaaaat
cttgttcagaatggcgctcatccccagatacgttctcctgttctttcaggatattcagaa
tcaccgtcaccatcaccagctgctactaaaccttttatacctagagctccttctcaatca
gcttcaagttctgcaccaatgccattgcctaaaggagatgcatccaagacttttactctt
cagtttggctccataaatcctggagtgatgggtggattacagtttcctgcacggaccagc
tcagcaccgccaaatctcgatgagcaaaatcacaaccaggctcacaccaagtcaatgaga
gttgttccttccatttctgtaccacagataaagagggatgttagtgtaccagccccgtct
gccacttatgtatctgcattaaattcctctggtccgccaatttctaggatgccttcaccc
ctgcacactcaatttcaacctcagcaaacacaaattctgccaaaatttggtgtccctaat
gtacagatgcatcagcctggttttgcagccaattcattgcaaatggcaatgacattacct
atggggaatagcccccaagttccacagcagattcttgttccaagtattcaacctcatttt
gtgcaacaacaggcaatgatgcaccagggacaggcacttgggtttgctcgttctattggt
caactgttgcccccacaattaggcaacatgagaattggcatttctccacagttcgcacag
caacaacctgttaaatatggtggggcacggaagaccacagtcaagattactcatcctgac
actcatgaagaactaaggcttgacaaaaatactgatttgggtaaggatggtgatcttgct
ggacaaaggccacagccaaatgtgattccacagcctcattctattcccacatatactcat
caaacgaatttctctccgatgcagcaaaattcttatagccattctcagcatatttttcca
aattctgttcctctgggaagtggacagatgcctacaaactcacaggccccaaggtataat
tatcctctcaatcaaattggcctaaacttgaacttcttagactcatctgcaatcaaccat
attcctagtggaaaaagtctatctacacctctgcatggtatttctgaagggcttaaattg
gaagcattgtcagtttctgcctcactgccctcttcaggccaggtaactttgagaccgcct
gttggatcaaaaactgtgaaaactggggcatctttgtcatcaccttctgtggttattacc
atgccttccaccaaagtagaaccacaaatgccagtaaaaactacagcagatgatactgct
cttaatgaaagacgggcagagaccaatccaggtggctctagccaacagattaaattgact
tccagttcctcagtcagtatgtctgtgcctgtcactgatataaataccacaattcctctt
aactcaagactgttcatgctttctgaagcttcactgtctccggaaacgccaaacagggaa
tctggatcacttttggatggaaatcatggcgaaaaaaatgagcatgctcaaagatgtgac
acttcaaaggataatcacgggaagacaagcaagaaggattttagaaacacccaacaaaat
catcagttagatgcatcttctaaaggagaaaaggtagctcctaaatgtgaaaataggact
cttacagaaactgaagttgctgagccagttgtagataaggtaatgcctgcagcatctggc
tcatttccagaaatatcaggtaaggaagcatcactggatgcttcagttggttatggcaat
ttgtcttctgcagcacctgatgttttatctaacaaagagaatctatcttctcatgcttct
acctcattggatcatgtagttggtggaattcctacctattgtctgactgttaacttaagg
gtgggaagcacagctttggctgttgggagagaaaaaagatctgagctaacagagaatgaa
tcctcggaagccgcaaatgattcattagaagattttagtaaagctaaagtacactcatct
tctgctgttgcaataccttctgaatttgagaacattacattgttaaaacaagatgacaaa
caagaaaaatgtttgaaagggaaatctatcaagtatgatgaggtagagagcgaacttctt
aacagctctggcggtgattttgcagtattgcaggaaagtaagacacagaatcaacaaatt
acctctactgatgcatctttaaactcaactggttctgatactgcagttgattgtgatatt
ctgggtgcaagagatgccaaggacaacctcaataccttctcaagcaaactcaaactgaaa
cccatcaaggatggtttgattgattgtagtggagcacgcatggaaacagtccttgtcccc
ataccatctgtgtctgtggaacataaacaaggtgctaaagttgatttgcctagtgataga
ttaacgtcttcaacaatcttggggcaaaagaataagcctttgttagaaaacacaaagcct
aaggtcactgctggcaaaaagaagaataggagggagatattttctaaagctgatgctgca
tgcgcatctgacctttacactgcatacaaaggaccagaggtaaaccatgaggttgttctt
aagtcagaaagttcaaatagtccaacagctgctgcaaatatcacacccattgggtgtcct
actaaggatgtggtttcaagtgatgaagatttgcagaataaggctgagttagatgattgg
gaaaatgcagttgatatatctactcctaagctaaaaacactgaaacatgggcaggatgct
ggtgaggcaagaaagcaacgtgatggagatgtttgcaaagccactacttggaagtactcg
agagatttcttaatgactctctcacaacattttactcagcttcctgttgattttgacaaa
agttcagatatattggatgtattgttgattttttcacaaggaaagtcaccattgcaaagt
cctaggaggatcaatgatcgaccatcttctcggggagactgccgtcctgttgggctgttg
gatgatgataaatggacgaaatcacatgcatcctttgggcgtgatggaaatgcgactatt
aatcttcgtccggggcaaggtggtagtcatgttgttttaagggatctacctcggcaggca
tccggccaacttggaggaattctatcaggaccaatgcaatctccatcatctcagggaggc
acacaacgtggtaatcttgatgccgcagatcggtggcaacgagcaagaggtttgattccc
tcttctcagactcccctacagataatgcaccaagccgagaagaagtatgtagttggaaag
gtgtctgatgaggaagaagcaaagcaaagacaactgaaagccatacttaacaagctgact
cctcaaaattttgaaaagctctttactctggttgaggaggttaatatagataatctggta
acccttactggcatcatctcacaaatatttgacaaagctttgatggaaccaactttctgt
gagatgtatgctaatttctgttttcatctagcaagcgcattgccagatttcagtgaagcc
aatgagaaaataacttttaaaagattgctcctgaataaatgccaggaggaatttgaaaga
ggggagaaagaacaggctgaggctaataatgttgaagaggaaggtgaggttaagcagtcc
aaagaggaaagggatgcgaaaaggctgcaggtccgcaggcgcatgttaggtaatatacgt
ttgattggagaattatacaagaagaagatgttaaccgagagaattatgcatgaatgtatc
aagaaattactgggtcaatatcaaaatcctgatgaggaagatattgaggcactgtgcaaa
ttgatgagtacaattggcgaaatgatagatcaccccaaggcaaaggaacatatggatgta
tattttgacatgatggccaagctttcaacaagtcaacagttatcttctcgtgtaagattc
atgttgaaagatgcaattgatcttagaaagaataaatggcaacacaggagaaaaattgag
ggcccaaagaagattgatgaggttcacagagatgcagtacaagaaaggcaagctcagtct
agtagattgtctcgtggtcctgtcaatagtagtgtcccaagacgtggtcaagcagctgat
tatggttctcgtgggtctgctccattaagctcttcaagttatcagcaggttggtggtcat
cgtgcattgccattgcaggttcgtggctatggtattcaagatccgcagttagaggataga
cctcagtttgaaggacgaaatacatcacttcccctccaacataggtctaatgatgatgat
tctatttcacttggtccccaaggtggcctagcacggggaatgtctgtccgtggacaccca
tcaatatctcatgcaccacctcctgaaatttctccaaatgctggtgaacagcatagattg
tcatctggtacaaatactatttatacagtagaaaggtctcctggagtgacatatgatcaa
ctaagccatcgagactggaacaatcagtactgcagtggagatgtaaaaatttcagaccat
acatttgaaagatctacaacaagtgacctacctggcgggcaattatatggcaattctagg
agctgcctaactgcagtttctggaacaaaagcattttcagaagatgtcttgcgagaaaaa
tccatttcagctattagagagttttacagtgccaaggatgagaaggaagttgcattatgc
atcaaggaattgaatgcaccaagcttttatccatctatgatctcaatatgggttactgac
tcctttgaaagaaacagtaatgaaagggatctcctagtgaagcttattatcaacctctgc
aaatctagagattgcttgcttagtcaatcgcaactactccaggggtttggatctgttctt
gcttcattggaggatgctgtaaatgatgcaccgagagcagcagagtttcttggttgcatt
tttgccaaaactattttggaagatgtggcagcattgagagagattgcaagattgatactt
gaaggaggtgaagagccgggccaactaagagaggttggcctagcagcagaggtgcttggt
aacatatttgagaccataaagttggaaagaggagattccatcttgaatgagatccgtgtt
agctcaaatctccggttcgatgacttcctaccaccgtctccattgaaagcaaaaaagttg
gatgcttttctttag
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integrated database retrieval system
