Zingiber officinale (ginger): 122015906
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Entry
122015906 CDS
T08725
Name
(RefSeq) eukaryotic translation initiation factor 4G-like
KO
K03260
translation initiation factor 4G
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122015906
03012 Translation factors [BR:
zof03012
]
122015906
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122015906
mRNA cycle factors
Stress granule specific factors
122015906
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
eIF-4
122015906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
122015906
NCBI-ProteinID:
XP_042428931
LinkDB
All DBs
Position
8B:complement(100015292..100031189)
Genome browser
AA seq
1876 aa
AA seq
DB search
MSVNQSRVERTDGQLKKSARLGSASQQRGFVGSGGWKGGGSAPPPISSTSTAPPPSSVSP
SLSTTRSFKKSANVQSQSVASSGYASSEASGTAPSTTGHHALENGAQLQTHSLGFSDVPD
PRSMKPVDMPIPRNTSRAIPKPPSSQSSAGFSNSLAPSTPTKGDASNTVALQFGSINPVI
MNGLQIPVPARTTSAPPNLDEQNHNQARTESLRTAPKMSAPCVPKQQQMKKDVVGARQSS
SEESHYVHVKGDLTVPVPSAPVVPVPKSSSLSIPGMSFPMAMSYQPQQPQVPTQYGSPNV
QLQPSGLTANSLQMPIALSVGNNSQVAQQIYVPSIQSHYVQQQTIMHPGQGIRFVPPISH
PLPQQLGSLGIGVSQFTQQHSGKYGSTRTVKITHPDTHEELKLDKNTGIIDSVSAAHRVL
PNVPQSQSVLPYAASHQMSFFPPMQQTSYSHPQLMFPTNVPLASGQMPASSQAPRFSYPV
NQSGQNLTLNSSILNMNPSGKSVSSAPLCGLTEGVNLDTLPVSASLSNAVLVRIKPSVGS
VKAGASLSTPSVVISMPSSKAEPTKSVKETEDNTSYKKKQTATKLDGPGQQLKSVSGQSH
TVKLPINETSSTDAVSVISTQITHCENSSPSETTGDSGIDLAGNDGSTNKPIRRSDSFKD
NQWNSCKKDLRNSQQRHQLNAYSAEGAKASPEFVNTVLLNVEAIEPVEGKVMPAESSSSK
EVLKNEASQDALLGYAYSFKENLPSASPASLCPIIDGTDTKNMDASSMVANTVLEVRKDH
ILEVAMPEKSKSSDDSSKDPNDFEVYSLSTHVKSSEHANAVTSSEQDNSVENFGKVRSGQ
YDKIIDKLLNGSNGDVGSQTQKNQILTLQNRPNGAYLDLDDSKTIVNSLSTKHEMKSSKD
VDLIDFVVASMEKANVSDQPLSVEHKPESKFLDFSSECKLEPKHLDSRDVLVSVTGLGQT
EKPLSETPKPKITTGKKKKKEMLSKADAADMSDLYTAYKGPEEEHTVKKLETINNSTHVI
NNTQTGNPSKDAASNEEDMHNSVELDDWENAADISTPKLKTTDRRQLNDDAAKQHKHSDG
YEANNQNKYSRDFLMALSQYCTQLPVNFEPGLDLDALLVNPSGQSPSPNPGRVNDRLSGV
SRADRRTVGPMDDEKWSKPQLSFSHENRMDYGYGNATVNLRPGQVGSHVVVRNLPRQTSN
QFGGGIHSGTMQSLVSQVGLPRGNLVADRWQHARGLIPSPHTPLQVMHKAEKKYEVGKAS
DEEQAKQRQVKAILNKLTPQNFDKLIAQVSEVNIDNAVTLTGVISQIFDKALTEPTFCEM
YANFCFHLARVLPDFSEDNEKITFKRLLLNKCQEEFERGEKEQEEANKDEEEGEVKQSKE
EREEKKLRARRLMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQNPDEEDIEALCKLM
STIGEMIDHPKAKEHMDAYFDVIAKLSMNQKLSSRVRFMLRDAIDLRKNKWQQRRKVEGP
KKIDELHRDAAQERQAQSSRLSRGPIMSNVPKRGSAVDYGSRGSNLLSSPSSQQVSGIRG
FLPQVRGSGTQDVRLEDRHQSEGRTMSLPLQHRSTDNDSITLGPQGGLARGMSIRGHSSI
SNIPSGEIASVGEHRRTLPGTNGSSYMAERSTGAAFDELRPGYRNNQQSSRDSKISDRPF
ERSSTTILPAGRTHGTSMSSLSTVPETKIFSENVLREKSISAIREFYSAKDEKEVVLCIK
ELNAPDFFPSMISLWVTDSFERKATERDLLAKLIISLCKSRDSLLSRTQLLHGFELVLSS
LEDAVNDAPRAAEFLGRLFTKVILQNVVALKDIGKLIHEGGEEPGRLKEIGLAAEVLENI
LPSIRSESGDVILNEF
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaatcaatctagggttgagaggaccgacgggcagctcaagaaatcggctcga
ttgggcagcgccagtcagcaaaggggattcgtcggcagcggcggctggaagggcggcggc
tccgcccctccgcccatctcctcaacatccactgctcctcctccatcgtctgtttcaccg
tcattgtcgactacccgaagcttcaaaaagtctgctaatgtacaaagtcaatctgttgcc
agcagcggatatgcaagttctgaagcaagtggcactgctccctccactactggtcatcat
gctcttgagaatggtgctcagctccagactcactcgcttggattttcagatgtacctgac
ccaagatctatgaaaccagttgatatgccaatccccagaaatacttcccgagctatccct
aagccaccatcttctcaatctagtgctggattttcgaattccctagcaccttccacacca
actaaaggtgatgcatccaacactgttgctcttcagtttggctcaataaatcctgtaata
atgaatggattacagattcctgttcctgctcggaccacctcagctccgccaaatctagat
gaacaaaatcacaaccaggctaggactgagtcactcagaaccgctcctaagatgtctgca
ccttgtgttcctaaacaacaacaaatgaaaaaggatgttgtcggtgctcgtcaatccagt
agcgaggaatcccattatgtacatgtaaaaggggatctcactgttcctgttccatctgcc
ccagttgtaccagtaccaaaatcatcatctctttctattcctggaatgtcctttcccatg
gctatgtcatatcaacctcagcaaccacaggttcctactcaatatggtagccctaatgta
cagttacagccatctggtctcacagctaattcactgcaaatgccaatagctttatctgta
gggaataattcccaagttgcgcagcagatttatgttcctagcattcaatctcattatgtg
caacagcaaacaataatgcatccaggacaaggtatacgatttgttcctccaattagccac
ccattgccacaacagttagggagcctgggaattggagttagtcagtttactcaacaacat
tctggaaaatatggttctacacggacagtgaaaattactcatccagatactcatgaagag
ttgaagcttgacaaaaacactggcataatagatagtgtatctgctgctcacagggtactt
ccgaatgttccccagtctcaatctgttctaccatatgctgcctctcatcagatgagtttc
tttccccccatgcagcaaacttcttacagtcatccgcagcttatgtttcctactaatgtt
cctctggcaagtggacagatgcctgcaagttcacaagctccaagatttagttatcctgtc
aatcaaagtgggcaaaatttgaccttgaattcatccatcttaaacatgaatcctagtgga
aaatctgtatcttctgcacctttgtgtggccttaccgaaggggttaacttggatacctta
cctgtttctgcctccctgtcaaatgcagtcctggtaagaataaagccttctgttggcagt
gtgaaagctggtgcatccttgtctacaccttctgtggttattagtatgccttcttctaag
gcagaaccaactaaatcagtgaaggaaactgaagacaatactagttataagaaaaaacag
acagcaaccaagctggatggacctggccaacaactgaaatcagtctctggacagtcacac
actgttaaattgcctatcaatgaaacaagtagtactgatgctgtctcagttatttcaaca
cagatcacacattgtgaaaattcatcaccttctgaaactactggggattcaggaatcgat
ttggctggaaatgatggcagtacaaacaaacctattcgaagatctgattcttttaaggat
aatcagtggaattcatgtaagaaggatcttagaaactcccaacaaaggcatcagttgaat
gcatattctgccgaaggagcaaaggcgtctcctgaatttgtaaacacagttcttttaaat
gtggaagcaattgagccagttgaaggtaaggttatgcctgctgagtctagctcttccaaa
gaagtactgaaaaatgaagcatcccaagatgctttactaggatatgcttattcattcaaa
gagaatttaccttctgcatctcctgcttctttgtgcccaataattgatggaactgacacc
aaaaatatggatgctagttctatggtggctaacacagttttggaggttaggaaagaccac
atattagaagtagcaatgcctgagaaatctaaatcatcggatgattcatcaaaggaccct
aatgattttgaagtatattctctttccacacatgtaaaatcttctgagcatgcaaatgca
gttacatcatcagaacaagataacagtgtagaaaattttggaaaagtgagatctggtcag
tatgataaaataattgacaaactgctaaatggctccaatggtgatgttggtagtcagaca
cagaaaaaccagatcctaactctacaaaataggcccaatggtgcatatttggacttggat
gactcaaagactatagttaattcattgtcaactaaacatgaaatgaaatccagcaaagat
gttgatttaattgattttgttgtggcctccatggagaaagccaatgtatctgatcaacct
ctttctgtagaacataaacctgagtcaaagtttttggattttagtagtgagtgcaagcta
gaaccaaaacatttggattcacgtgatgtattggtttctgtgacaggcttgggacaaaca
gagaaacctttgtcagaaactccaaagcctaagattaccactgggaaaaagaagaaaaag
gaaatgctatctaaagctgatgctgccgacatgtctgatctttacactgcatacaagggt
ccagaggaagaacatactgtcaaaaagctagaaactataaataattcaacacatgtaata
aataacacacagactggcaatcctagtaaggatgctgcttcaaatgaagaagatatgcat
aacagtgttgagctggatgactgggaaaatgctgctgatatttcaactccaaaactaaaa
acgacagatcgtcgacagcttaatgatgatgccgcaaagcaacataaacatagtgatggt
tatgaagccaataaccaaaacaaatactccagggattttctaatggccctctcacaatat
tgtactcagcttcctgtgaattttgagcctggtttagatttagatgcattgttggtcaat
ccatcaggccaatcaccatccccaaacccagggagggtcaatgatcgactatcaggtgtt
tctcgagcagatcgacggacagttggccctatggatgatgagaagtggtcgaaaccacaa
ctgtcatttagccatgaaaacaggatggattatggatatggaaatgcaactgtcaacctt
cgtcctgggcaagttggcagtcatgttgttgtgaggaatcttcctcggcagacatcaaat
caatttggagggggaatacattcagggacaatgcagtctctggtatctcaggtaggctta
ccacgaggcaatcttgttgcagatcggtggcaacatgcaagaggtttaataccctcccct
catacacccttacaagtaatgcacaaagctgagaagaagtatgaagtgggcaaagcttct
gatgaggaacaggcgaagcaaagacaagtaaaagctattcttaacaaattgacacctcaa
aattttgacaaacttattgcccaggtcagcgaggttaacatagacaatgcggtcaccctt
actggtgtcatatcacaaatttttgacaaggctttgacggaaccaaccttttgtgaaatg
tatgcaaatttctgtttccatctagctcgtgtgctgccagatttcagtgaagacaatgaa
aagataactttcaaaagattgctcctgaacaaatgccaagaagaatttgaaagaggggag
aaagaacaagaagaagctaataaagatgaagaggaaggtgaggtcaaacagtccaaagag
gaaagggaagaaaaaaagctccgggcccgaaggctaatgttgggtaatatacgtttgatt
ggagaactatacaagaaaaagatgttgacagagagaattatgcatgagtgcatcaagaaa
ttgttaggtcaatatcaaaatcctgatgaggaagatattgaagcattgtgcaagttaatg
agtacaattggggagatgatagaccaccctaaggcaaaggaacatatggacgcatacttt
gacgtgatagctaagctatcaatgaatcaaaagttatcttctcgtgtaagattcatgttg
agggatgcaattgatcttagaaaaaataaatggcaacaaaggagaaaagttgagggacct
aagaagattgatgagcttcacagagatgcagctcaagaaaggcaagctcagtctagcagg
ttgtctcgtggtcctataatgagtaatgtcccaaaacgtggttcagcagttgattatggt
tcccgtgggtccaatttactaagctctcctagttcccagcaggtttctggtattcgtgga
ttcctacctcaagtccgtggctcaggtacccaagatgtacggttagaggataggcatcag
tctgaagggcgaactatgtctcttcccctccaacacaggtctaccgacaatgattctatt
accctgggtcctcaaggtggcctggccagaggaatgtccatcagaggacattcatcaata
tccaatatacccagtggtgaaattgcttcagttggggaacatcgtcgaacattacctggc
acaaatggttctagctatatggcagaaaggtctactggagcagcatttgatgaactaaga
cctggatatcgaaataatcaacagagtagcagagattcaaagatctcagatcgtcccttt
gagagatcttctacaacaatacttcctgctgggcgtacccatggcacttctatgagcagc
ctatcaacagttcctgaaacaaaaatattttcagaaaatgttctacgagaaaaatccatt
tcagcaattagagaattctacagtgccaaggatgagaaagaggttgtattgtgcatcaag
gaattgaatgctccagactttttcccctcaatgatatcactttgggtcaccgactccttt
gagaggaaagccacggaaagggatctactagcaaagctcattatcagcctctgcaaatct
agagatagtttacttagccgaacacaactactccacgggtttgaattggtcctttcttca
ttggaagatgctgtgaacgatgcgccacgggcagcagaatttcttggtcgattatttacc
aaagttattttacaaaatgtggtggctctgaaagatataggaaaactgatacacgaagga
ggtgaagaaccagggcgactgaaagagattggactagcagctgaggtgcttgagaatatc
cttccgagcataaggtcggaaagtggagatgtgattttgaacgagttctga
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integrated database retrieval system
