KEGG   Zingiber officinale (ginger): 122015962
Entry
122015962         CDS       T08725                                 
Name
(RefSeq) glutamate--tRNA ligase, chloroplastic/mitochondrial-like
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof00860  Porphyrin metabolism
zof00970  Aminoacyl-tRNA biosynthesis
zof01100  Metabolic pathways
zof01110  Biosynthesis of secondary metabolites
zof01240  Biosynthesis of cofactors
Module
zof_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:zof00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    122015962
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    122015962
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:zof01007]
    122015962
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:zof03016]
    122015962
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:zof02048]
    122015962
Enzymes [BR:zof01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     122015962
Amino acid related enzymes [BR:zof01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   122015962
Transfer RNA biogenesis [BR:zof03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    122015962
 Prokaryotic type
   Other AARSs
    122015962
Prokaryotic defense system [BR:zof02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    122015962
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-GeneID: 122015962
NCBI-ProteinID: XP_042429008
LinkDB
Position
8B:22608538..22618284
AA seq 571 aa
MSSLAMGSPWVRIMVLQELRPPFCLPGLALKTCLSIRRRNLSVSASAVTDPSGGEVRVRF
APSPTGNLHVGGARTALFNYLFARSQGGKFVLRIEDTDLERSTRKSEEAMLNDLSWLGLD
WDEGPGVGGEYGPYRQSERNSMYKEYAEKLLESGTVYKCFCSNEELEQMKETAKRLQLPP
VYTGKWGTAPDKEIQEELAKGTPYTYRFRVPKEGILKITDLIRGEVSWNLDTLGDFVIMR
SNGQPVYNFCVTVDDATMRISHVIRAEEHLPNTLRQALIYKALGFPMPSFAHVSLILAPD
RSKLSKRHGATSVGQFRDMGYLPQAMVNYLALLGWGDGTENEFFTINQLVEKFSISRVNK
SGAIFDGTKLRWMNGQHLRSLPPEELISIFRDRWKSTGILLEYDGAFVKGATELLKDAIE
LVSDAEKALQNLLSYPLHSTLVSDECKPVVQDKLSEVAASLISAYESGELRQALEEGHAG
WQKWVKSFGKSLKRKGKSLFMPIRVLLTGKLHGPDMGGSIILIHKAGTCGAISPQAGFIT
LDERFKMLKEVDWESLPQVEEPLQSPAGVPS
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgtcgagtctggccatgggatcgccgtgggttcggattatggttcttcaggaactccgt
cctcccttctgcctgccgggactagccttgaagacctgcctttcaatacggcggaggaat
ctctccgtctcagcttccgccgttaccgacccctccgggggcgaggtgcgcgtccgtttc
gctccttctcctacagggaacttgcacgtcggaggagcaaggacggcgctctttaactac
ttgtttgccaggtctcaaggtgggaagtttgttctgcgaattgaggacactgatttagaa
agatctaccaggaaatcagaagaagcgatgctgaatgatttatcttggcttggtcttgat
tgggatgaaggtcctggtgtgggtggagaatatggtccttatcgacaatcagaacggaac
tccatgtacaaagaatatgctgagaagttgttggaatctggcactgtttataagtgtttc
tgttctaatgaggaacttgaacaaatgaaggaaacagcaaaaaggttgcaactgccacca
gtatacacaggaaagtggggcacagctccagacaaggaaattcaggaggagctggcaaaa
ggtacaccatacacataccgcttccgtgtaccaaaagaaggaatcttgaagatcacagat
cttatccgtggtgaagtcagttggaacctggatacacttggtgactttgtgattatgagg
agtaatggacagcctgtatacaatttctgtgtcactgtcgatgatgctactatgcgtatc
tcacatgtcataagagctgaggaacatttaccaaacaccttgcgacaagcacttatatac
aaagcacttggatttccaatgccttcttttgcacatgtctctttaattctagccccagat
agaagtaaactatcaaaacgtcatggagcaacatctgtagggcagtttagagacatgggt
tacttgccccaggcaatggtgaattacttggcactattaggttggggtgatgggacagaa
aatgaattcttcaccatcaatcaacttgttgagaaattctccattagccgcgttaataaa
agtggagcaatctttgatggaacaaagttaaggtggatgaatgggcagcatttaagatct
cttcctccagaagagttgatctcaattttcagagaccggtggaagtccacaggaattctc
ctagaatatgatggtgcatttgttaagggtgcaacagagctgttaaaggatgccattgag
ttagtgtctgatgcagaaaaggctctacaaaacttgttgtcgtatccactgcactcgact
ttagtcagtgatgaatgcaaacctgttgttcaagataagctctcggaggtggctgctagt
ttgatatctgcttatgaaagtggagagctccgtcaagcgctggaggaaggccatgctggt
tggcaaaaatgggtgaaaagctttggcaagtctttgaaacgcaaggggaaatctctattt
atgcctattcgggtattgctcaccggtaaactacacggccccgacatgggaggaagcata
attctgatacataaagcaggtacctgtggagcaatcagtccccaagctggtttcataacc
ctagacgagaggttcaagatgctcaaggaggtggattgggagtcactgccacaggtggag
gagccactgcagtctccggccggagtaccttcctaa

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