Zingiber officinale (ginger): 122016067
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Entry
122016067 CDS
T08725
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1-like
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
122016067
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
122016067
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
122016067
NCBI-ProteinID:
XP_042429169
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All DBs
Position
1A:4726890..4736999
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AA seq
702 aa
AA seq
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MEHLREIYKCLKTLVDFLLCRRDRLPKRDPKPWDPPFDPSQPSPPISYPITSLEALASRS
YLRSFHFPFNRASVPLPSSAAFLPPRRRILVCHDMMGGYVDDLRVQGSGNPGAYAIWHWY
LMDVFVYFSHDLVTLPPPCWTNAAHTHGVKVLGTFLVEWDEGRVICDTLLSSKESSQMYA
ERLTELASALGFDGWLVNIEVNLDKKQVNNLKEFVHHLSCTMHSSVPGSLVIWYDAVTID
GKLAWQNKLNDANKPFFDLCDGIFVNYTWQEGYPNVSAVNAGKRRLDVYMGIDVFGRNTF
GGGEWNSNIALDALKKDDVSAAIFAPAWVYETNQKPDFQTAHNRWWGLVEQSWGILQHYP
KELPFFSDFDQGHGYHFSIEGFQVAKDPWNNISSQGFQPILGNPVNHNSSSTIEAFINFK
DASYSGGGNITAKGSLMDNSFFSAKLFHGQLLLDDQPVYISYSVKVDENSLFGLHLELLS
ETNGRTCVLIASDSESFTNAGLEYNIIIKPQIKSKVEDALAYPPWFIHEAVLTLGDYTLA
GIYMVSTLKSRGLITIQNNKSSSQEGTLPETSGSSLYYASLGHISIRNKEDGAEYPPADL
WITRAQNILCTSDSLGNKMLNLKLTWKLNEGSTTSFQRYNIYAQSGSGLQYLGPARAEVF
YVSDLSVYIGVTTLRFIIQVRGLDGTCQKLAESPYLDLTLED
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggagcacttgcgcgagatctacaagtgcctcaaaaccctagtcgatttcctcctctgc
cgtcgcgaccgccttccgaagcgcgaccccaagccatgggatcctcccttcgacccgtcg
cagccctctcccccgatctcctatcccatcaccagcctcgaagccctcgcctcccgctcc
tacctccgctcttttcatttccccttcaaccgcgcctccgtcccactcccgtcctccgcc
gcctttcttcccccccgccgcaggatcctcgtttgccacgacatgatgggcgggtacgtc
gacgacctgcgagtgcaggggagcggcaaccccggagcatacgcgatttggcattggtac
cttatggatgtcttcgtctacttctcgcatgacctggtcacgctgccgccgccgtgctgg
accaacgctgcccacacccatggcgtcaaggtcttaggaactttcttggttgaatgggat
gaaggtagagtaatttgtgataccttgctttcgtcaaaggagtcttcccaaatgtatgct
gaacgacttacagaactagctagtgctttgggatttgatggttggctggtcaatatagaa
gtcaatctggacaagaagcaagttaataacttgaaggagtttgtccatcatctgtcgtgt
actatgcattcctcagttcctgggtctttagtcatatggtatgacgctgtaactattgat
ggtaaacttgcctggcaaaacaaactgaatgatgccaacaagccattttttgatttatgc
gatggtatttttgtcaactatacttggcaggaaggttaccccaatgtttcagctgtcaat
gcaggcaagagaaggttggatgtttacatgggcattgatgtttttggcagaaacaccttt
ggtggtggagagtggaattcaaacatagcccttgatgctctaaagaaggatgatgtttca
gctgcaatatttgctcccgcatgggtatacgaaactaatcaaaaacctgactttcaaact
gcacataatcgctggtggggccttgttgagcagtcatgggggatccttcagcactaccca
aaagagttgcccttcttttcggactttgatcagggtcatggctatcatttctccattgaa
ggttttcaggtagctaaagatccatggaataacatatcttcacaaggctttcagcctatt
cttggtaatcctgttaaccataatagctccagtaccattgaagcttttatcaatttcaag
gatgcatcttattctggaggaggaaatattactgctaaaggaagtctaatggataactct
tttttctctgcaaagctcttccatggacaacttctattggatgatcaacccgtgtacata
tcatattctgtaaaagtagatgaaaattctctctttggattacatcttgaattgttatca
gaaaccaacggaaggacgtgtgtccttatcgcaagtgattctgaatctttcaccaatgca
ggcctagagtacaatataatcatcaagccccaaataaaaagtaaggtggaggatgcattg
gcttacccaccttggtttatacatgaagctgtcttgacactgggcgactatacattagct
ggcatttatatggtatctaccttgaaaagtcgtggcctgattaccatacaaaacaacaaa
agttcatctcaagaaggtaccttaccagaaacctctggatcttcactctactatgcatca
ctaggtcacatcagcattcgaaacaaagaggatggcgcggaatatccaccagcagattta
tggatcactcgagctcagaatattctgtgcacctcagattctcttggaaacaaaatgctc
aacctgaaactaacttggaagctcaatgaaggatccacgacatcatttcagagatataac
atctacgctcaaagtggctcaggcctgcagtacctgggtcctgctagagctgaagtattt
tacgtttcagatcttagtgtttatattggagtcacaaccctcaggtttatcattcaagta
cgtggccttgatggaacatgccaaaagcttgctgaatctccttatctggatttgactctt
gaggattaa
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