Zingiber officinale (ginger): 122016081
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Entry
122016081 CDS
T08725
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122016081
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122016081
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122016081
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122016081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
HEAT
CEP104-like_TOG
XMAP215_CLASP_TOG
TOR1L1_N
HEAT_DAAF5
UTP20
Adaptin_N
Cnd1
Vac14_Fab1_bd
MMS19_C
INTS1_R4
Sec7-like_HUS
HEAT_Maestro
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
122016081
NCBI-ProteinID:
XP_042429198
LinkDB
All DBs
Position
8B:101961395..101981405
Genome browser
AA seq
1049 aa
AA seq
DB search
MKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADAAKNDKSAVLRARCCEYALLILE
YWADAPEIQRSADLYEDLIKCCIADAMSEVRSTARTCYRMFTKTWPERSRCLFVSFDPVI
QRLLNEENGGMHKRYSSPSLRERGAQFSRAPSQSTSICMPGYGTSAIVAMDKSSVISSGT
SLVPKSKSLGKNSERSLESVLHASKQKVLAIESLLKGIGMSDKQNFATARSTSLDLGVNT
LSTRDTPLATSVSSSSFSVQSSLLGDSTIASIRKASNRNGGLNMSDLVSQVQLSRDPSKL
SFLSHATPVSLTSLSSSHLKWSSERLQDGSGSENNVDHRLSRRLPSIQTDKHYLETPSKD
SSYRDSQNPYVPNFQRPLLRKQVTGKAVANARNSLDDGQILASEMPSYIDGPTTLGETLN
EGLNPSSDWVARVSAFNYLWSLLQQGPKGVLEVTQNFEKVMKLFFRYLDDPHHKVAQAAF
ITLAEIIPACKKPFENYLERTLPHIFARLIDPKELVRQPCSATIEIIGKTYNMDSLLPAL
VRSLDEQRSPKAKLAVIQFANNSFNKHTINSDGYSNNGFLKLWLAKLLPLANDKNVRLKE
TSTSCIISVYSHFDAIGVLNFILSLSVEEQNLLRRKLKQYTPRIEVELMNYLQNKKERQR
PKSFHDQSNVVGTSAEEDYVGASKKGFYCANYSTSSVDGEVGKKLSSTQQSMQFDTYTIH
ATSDESHHPSQNVDACACDPSSQDGLVTNSSQKTNYNIEHESSLLTLRLDMSELASSDEH
KAIDMNGGSEIYGDPELNHNNLNFLKSNIEGDMGPSIPQLLHQICNVNDANSSSEKRDTL
QQLAEVSLKNDSSVWAKYFNQILAAVLDVLDDSDPSVQELALSVIVRMLDNQKSEMEDSI
DIVTEKLIHVSKDDVVKVSNEANQCLNIILTHFDPYRFLSVIVPLLVSDDEKSLVICINC
LTKLVGRLPQEDLMKHLPSCLPALFDSFGNQSPDVRKAVVFCLVEIYIILGKSFLPYLEG
LSSTQLRLVTIYANRISQARSGASLDSNH
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgttgtgataactgttcttgtgattgcagagtctgcagataattgcattaaa
acaatgttgcgaaactgcaaagttgcccgtgttctccctcggatagctgatgctgcaaag
aatgacaagagtgctgttcttcgggccaggtgttgtgaatatgcacttctgatactggag
tactgggctgatgctccagaaattcaacgttctgctgatttatatgaagatctaatcaag
tgttgtatagcagatgcaatgagtgaggtgcgatcaactgctcgaacatgctaccggatg
tttacaaaaacttggccagagaggtctaggtgccttttcgtatcatttgatcctgtcata
cagaggttattgaatgaagagaatggaggaatgcacaaacgatattcttctccttccctt
cgtgaaaggggagcgcaattttctcgtgctccatctcaatccacgagtatatgcatgcct
ggatatggtacctctgcaattgttgcaatggataagagttcagttatttcttcagggact
agccttgtgccaaaatctaaatcacttggtaaaaattcagagagaagcctagaaagtgtg
cttcatgcaagcaaacagaaggtgctagctattgagagtttactgaaaggtattggcatg
tctgacaagcaaaactttgctactgcacgctccacaagcttggacctaggtgttaatact
ctatctacccgggatacaccacttgctactagtgtttcctcaagttctttttctgtgcaa
agttcgctattgggtgattcaaccattgcaagcattagaaaagctagtaacaggaacggt
ggtttaaatatgtctgacttagtcagtcaggttcaattatctagagatccatcaaaactc
tctttcctcagtcatgcaacacctgtttccctgacttctttgtcttcatcacatttgaaa
tggtcatctgaaaggttgcaagatggaagtggtagcgaaaataatgttgatcacaggtta
tctaggcgacttccaagtatccaaactgataaacattatctggagacaccatctaaggat
tctagctatagggattcacagaatccttatgtccccaactttcagcggcctcttctaaga
aagcaggtgactggaaaggccgtggcaaatgctagaaatagtttggatgatggtcaaatc
ctagcaagtgaaatgcctagctatatagatggtccaactacccttggtgagacacttaat
gagggactaaaccccagttcagattgggtagcaagggtttctgcattcaattacctctgg
agtttgttgcagcaaggcccaaaaggtgttttggaagtcacacagaattttgagaaggtt
atgaagttattttttcgatatttagatgaccctcaccataaagttgcacaggcagcattt
atcacccttgctgaaattattccagcttgcaaaaagccttttgagaattatcttgaaaga
accttgccccatatttttgctagattaattgatccaaaggaacttgtaaggcaaccatgt
tctgcaacaattgagataattggaaagacatacaatatggattctcttcttcctgctctt
gtccgctctcttgatgagcagagatctcctaaagcaaaattggctgtcattcagtttgca
aataactcctttaataaacatacaataaactctgatggttatagtaacaatggatttctt
aagctatggcttgctaagttattgcctttggcaaatgacaaaaatgtaagattgaaggaa
acatccacatcttgcatcatatcagtttattcccattttgatgcaattggagtcttgaat
ttcattttgagtctttctgttgaagaacagaacttgttaagacgaaaacttaagcaatat
acacctcgtatagaggtcgagttaatgaactacttgcagaataagaaagaacgtcagcgt
ccaaaatctttccatgaccagtcaaatgttgttggaacttctgctgaggaagactatgtt
ggagcttcaaagaaaggtttttattgtgcaaattactcaactagttcagttgatggtgag
gttgggaagaagttgagttcaacccagcaatcgatgcagtttgatacttacaccattcat
gcaacttctgatgagtctcatcatccttctcagaatgttgatgcttgtgcttgtgatcct
tcatctcaagatgggttggtgactaattcctcgcagaaaacaaattataatattgagcat
gaaagttctctgttaactctgcgtctagacatgagtgaactagccagttctgatgaacac
aaagccattgatatgaatggtggaagtgaaatttatggagatcctgaactgaatcataat
aatcttaattttttaaaatctaacatagaaggagatatgggacctagcattccacaactt
cttcatcagatttgcaatgtaaatgatgcgaactcaagttcagagaaacgtgacaccttg
caacagctggctgaagtttcattaaagaatgatagttctgtctgggcaaagtatttcaat
cagatcttggcagctgtgcttgatgtgttggacgattcagatccttcagtgcaggagctg
gctctttctgtgatagttagaatgcttgacaaccagaaaagtgaaatggaagattcgatt
gatattgtcactgagaagttgattcatgtgtctaaagatgatgttgtgaaggtttcaaat
gaagcaaaccaatgcctgaatattatcttgacgcactttgatccatacagatttctaagt
gttatagttcctctattagtcagcgatgatgaaaaaagtcttgttatttgtatcaactgt
ttaaccaagcttgttgggcggcttcctcaagaagatttgatgaagcatttgccttcatgt
ttgccagcattatttgattcattcggaaaccaaagtccagatgtgagaaaggctgttgtt
ttctgtttggtggaaatctatatcatattggggaagtcgtttttaccttatctggagggt
ctaagtagtacacagcttcggttggtgaccatctacgcaaacagaatttctcaggcaaga
tctggtgcttcacttgattctaaccactaa
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integrated database retrieval system
