Zingiber officinale (ginger): 122016123
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Entry
122016123 CDS
T08725
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122016123
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122016123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_4
zf-C2H2_STOP2_C
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
122016123
NCBI-ProteinID:
XP_042429254
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All DBs
Position
8B:complement(102336273..102339559)
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AA seq
546 aa
AA seq
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MASASSSSPFHGIRDREEHLQNRMKTATTTPPDHELQQQSSSSAAPAKKRRSQPGNPNPD
AEVIALSPTTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKLKSSKEPPRRKVYL
CPEPSCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCAKRYAVHSDLKAHAKTCGTRE
YRCDCGTLFSRRDSFITHRAFCDALAQESTRLPAAGCVGGAAALGNHHHLYGSGMMHAPV
NLSQVGSQQLSSLRDQSNDASQFHQQLVNPLSGSPAQFRSTTPTANFYLGNGGVQDFNAE
EQSSLLQRKPFHGLMQLPDLQGNASSSNFFNLGFFSNNNAVDGGGGGGADPTSFFSGNLI
VDGQMASPSLYDTESSSSVHPRMSATSLLQRAAQMGSTTSAGPGGGGSLLLAGFGNPKPP
PPSFGGGLDAFHTDMDNVASFQNIMNAFANGGTAGPGLFSSVAGFGEGAPRHDPRELTRF
VSTGLDDPVDTKFNLAGGGLGGSDHLTRDFLGVGGMARSIGGGAAAAAMSLREQVHGMDV
SMLDPK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagcttcctcgtcgtcacctttccatggaattagagatcgagaggaacatcta
caaaatcggatgaagacggccacgacgacaccgcccgatcatgagcttcagcaacagtct
tcttcttcggcggcgccggcaaagaagagaagaagccaaccagggaatccaaatcccgac
gcggaggtgatcgcgctgtcgccgacgacgctgatggcgacgaaccggttcgtgtgcgag
gtgtgcaacaaagggttccagcgggagcagaacctgcagctccaccggcgcggccacaac
ctgccgtggaagctcaagctgaagagctccaaggagccgccgcgccggaaggtgtacctc
tgccccgagccctcctgcgtccaccacgaccccgcccgcgccctcggcgacctcaccggc
atcaagaagcacttctgccgcaagcacggcgagaagaagtggaagtgcgacaagtgcgcc
aagcgctacgccgtccactccgacctcaaggcccacgccaagacctgcggcactcgcgag
taccgatgcgactgcggcaccctcttctccaggcgcgacagcttcatcactcaccgagcg
ttctgcgacgcgctggcgcaggagagcacgaggttgccggcggcggggtgcgtcggcggt
gccgcagccctcgggaatcaccaccacctctacggaagcggcatgatgcatgcgccggtg
aatctgtctcaggtgggctcgcagcagctctcgtcgcttcgagaccaaagcaacgatgcg
tcgcagtttcatcagcagcttgtcaatcccctgagcggctctccggcgcagtttcggtcg
acgactccgacggcgaacttctacctcgggaacggcggcgtgcaggacttcaacgctgag
gagcagtcgtctctgctgcaaaggaagccttttcatggcctgatgcagctcccggatctg
caaggaaatgcctcttcgagtaactttttcaacctcgggttcttctccaacaataatgcc
gtcgacggcggcggcggcggcggtgccgacccgacctcgttcttctccggcaacctcatc
gtcgatgggcagatggcttctccttctctttacgacaccgagtcatcctcgtcagtccac
ccgcggatgtccgccacttcgctgctgcagagagcagcccaaatgggctccaccacaagc
gccggccccggcggcggcggatccttactactggcaggattcggcaaccccaaaccgccg
cccccaagcttcggcggcggcctagatgcctttcacaccgacatggacaacgtggccagc
ttccaaaacataatgaacgcgttcgcaaacggaggcaccgccggccccggcctgttcagc
agcgtcgcggggttcggcgaaggcgctccacgacacgacccacgggaactgacccgcttc
gtcagtactggactggatgatccagtcgacaccaagttcaatctcgccggcggtggcctt
ggcggctccgaccacctgaccagagacttcctcggagtcggcggcatggcgaggagcatc
ggaggcggcgccgccgccgccgccatgtccctaagggaacaggttcacggcatggacgtg
agcatgctggatcctaaatga
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