Zingiber officinale (ginger): 122016137
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Entry
122016137 CDS
T08725
Name
(RefSeq) transcription factor HY5-like isoform X1
KO
K16241
transcription factor HY5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122016137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122016137
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
122016137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
APG6_N
bZIP_Maf
TSC22
DMPK_coil
Uso1_p115_C
GAS
WHD_MCM2
FlaC_arch
DUF444
DUF3563
V_ATPase_I
GIT_CC
DivIC
Nnf1
NRBF2
FKBP15
Motif
Other DBs
NCBI-GeneID:
122016137
NCBI-ProteinID:
XP_042429284
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All DBs
Position
8B:complement(23619350..23632119)
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AA seq
174 aa
AA seq
DB search
MLQEQGNSSLPSSSERSSSSALQMEGKEGMESDEEIRRVPDFGFDLAGPSTTGREAALAA
GPERAQSTAQSGRKRRGRSPADKEHKRLKRLLRNRVSAQQARERKKAYLNDLEVKVKDLE
ARNSELEERMSTLQNENNMLRQGIKVVKWMKKRLQAPRQPGCGRRRLTEVVIAV
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaagagcagggaaacagctctcttccttcgagcagcgagaggtcttccagctcc
gccctccagatggaaggcaaagagggaatggagagcgacgaggagatcaggagagtgccg
gatttcggattcgatttggccggcccgtcgaccaccggtagagaggctgctttggcggct
ggtccggagcgagcccagtccaccgctcagtctggccggaagcggagagggaggagccct
gccgacaaggagcacaagcggctgaagaggttgctaaggaacagagtctcagctcagcaa
gcaagggagaggaagaaggcctacctgaatgatttggaggtcaaggtgaaggatttagag
gccaggaattctgaactagaagagaggatgtctacattgcaaaatgaaaacaacatgcta
agacaaggaatcaaagttgtaaaatggatgaaaaagaggctccaagcgcccagacaacct
gggtgcggcaggaggcgactaactgaggtggtgatcgctgtttag
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integrated database retrieval system
