Zingiber officinale (ginger): 122016179
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Entry
122016179 CDS
T08725
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
122016179
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
122016179
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
122016179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
122016179
NCBI-ProteinID:
XP_042429337
LinkDB
All DBs
Position
8B:21850546..21854969
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AA seq
502 aa
AA seq
DB search
MSEGTIAVEVSGLPQARAAMTARVRRQAWFVTACGCVLLWTCLIQLLAYGRLWQSWNPAR
FFLVLRDDVAGVGSSSAPPPLTPPSPGLQSRNYTSNGYLKLSCNGGLNQMRAAICDMVMV
ARLLNLTLVVPELDKNSFWADPSNFDDIFDVRYFIKSLKDEVRIIKKLPNSINRNASSQF
FMMRPVSWSDEKYYIQQILPLFNKFNVIHFNKTDARLANNLAFELQKLRCRVNYHALKFS
PQIMTLGNKLVQILRGKGSFVTLHLRYEMDMLAFSGCTHDCSEKEAEELKRLRYAYPWWR
EKEINSTAKRLQGLCPLTPEETTLILKALGFDKDTVIYIASGEIYGGEKRLSVLRAEFPN
LVKKEMLLNSEDLQQFQNHSSKMAALDYMVSLASDTFIPTYDGNMAKVVEGHRRYLGFQK
TILLDRRKLVKLLDMHNNKTLPWDEFASSVKQVVNGSLGQPICRKVLINKPKEEDYFYAN
PHECLTNAKECLNVPYQSNSSR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggcaccatcgcggttgaggtcagcgggctgcctcaggcgagagccgcgatg
acggcgcgggtgcgacggcaggcgtggttcgtgaccgcgtgcggttgcgtcctcctctgg
acgtgcctgatccagctccttgcctatgggcgtctctggcagagttggaatcccgcgcgg
tttttccttgtcctcagggacgacgtcgccggtgttggatcgagttcagctcctccgccg
ctcacacctccatcaccagggctacagtcgagaaattatacaagcaacggctatctaaaa
ctatcatgcaatggtggcttgaaccaaatgcgtgcagcgatatgtgacatggtgatggtg
gctcgcttactgaacctaacactagtggtcccggaactggacaagaattcattttgggct
gacccaagtaattttgatgatatctttgatgtgaggtatttcatcaaatcactgaaagac
gaagtgcgaataattaaaaagctgccaaatagcataaatagaaatgcttcaagccagttt
tttatgatgcgcccagtgagttggtcagatgagaaatactacatacaacagattttgcca
ctgttcaacaagtttaatgtgattcattttaataaaacggatgcacgattagcaaacaat
cttgcttttgagctccagaagcttagatgccgtgtaaactatcatgcgctgaaattttct
cctcagatcatgacattgggaaacaagttggttcagattcttcgagggaagggatccttt
gttaccttacatttgagatatgaaatggacatgctggccttttctggttgcactcatgat
tgttctgagaaagaagctgaagagcttaaaagattaaggtatgcctatccttggtggcga
gaaaaagagataaattccacagccaagagactgcaaggcttgtgcccacttacacctgag
gaaaccacccttattctcaaagcattgggctttgacaaagacactgtaatatacatcgcc
tctggtgagatttacggtggggaaaagaggctatcagttttgcgtgcagaatttcccaat
ctcgttaaaaaggagatgttgcttaattcagaagatctgcagcagttccaaaatcactca
tccaaaatggctgcacttgattatatggtttcgttggcgagcgacactttcatcccaaca
tatgatggaaatatggccaaagttgttgaggggcatcgaaggtaccttgggtttcagaaa
actatcttgctggaccgcagaaaattggttaagcttcttgatatgcataacaacaaaaca
cttccatgggatgagtttgcatcttcagtgaaacaagttgttaatgggagtcttggacag
ccaatctgtcgaaaagttctcatcaacaaacctaaagaggaagattacttctatgctaac
ccgcacgaatgcctaaccaatgcaaaggagtgccttaatgtaccttaccagtcaaactca
tcgagatga
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