Zingiber officinale (ginger): 122016215
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Entry
122016215 CDS
T08725
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122016215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122016215
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122016215
Hops complex
122016215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
122016215
NCBI-ProteinID:
XP_042429380
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Position
8B:complement(103290338..103346780)
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AA seq
607 aa
AA seq
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MAQIPNLDTAPLNLTSLREQSQKELLNILKNIRGNKCLVIDPKLSGSLSLLIQTSLLKEN
GVELRHLSPEPVQTECTKILYLVRSQTNLMKLISSNIHNDLSKGVQREYFLYFVPRRTVV
CEKIFEDQKIHHLLTIGEYPLYMLPLDEDVISFELDLSYKECCVDGDTSSLWHIAKAIHK
LEFSFGFIPNVRAKGKASTKVAEILNSLQVEEPVSSTDLGIPEINTLILLDREVDLVTPM
CFQLTYEGLLDEILQINNGSVEVDTTVMGSQQDGKKVKVPLNSSCLFVFFLCFPSDKLFK
EIRDMNFEVVVQVLRQKATSIQQDYAEVKSQSQSVSELKDFVKKLNSLPEIARHVNLAQH
LQSFTSKPSFHARLDIEQTLLELQNYDICFEYIEEMIHKQESLANVLRLLVLFSITNSGL
PKKNFDYLRREILHSYGFEHMPTLYNLEKAGLFKKQESKSNWLAIARAFQLIVEETDTAN
PKDISYIFSGYAPLSIRLVQHAIRSGWRSMEEILKLLPGPHVDLKRGVPNSNSLLDANPA
FQSNFDRVTDGRRSLALVVFIGGISFAEIAALRFLSSQEGMGYDFLIGTTKIINGTTLLE
TLMGYKD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattcccaacctcgacaccgccccactcaatctcacttcccttagggaacaa
tctcagaaggagctgcttaacatccttaagaacattcgaggtaataaatgcctcgtcatc
gacccaaaactcagcggatcgctttctctcttgatccagacgtcgctcctcaaggaaaat
ggtgttgagctgcggcatctctctcccgagcctgttcaaactgaatgtaccaagatattg
tatcttgtgcgatcccagaccaacttgatgaagctgatttcgtcaaacattcacaatgat
ctatccaaaggagttcagagagaatactttctttattttgttccacgtcgcacagttgtc
tgtgaaaagatctttgaagaccaaaagattcaccatctattgactattggagaataccct
ttgtacatgttgccactagatgaggatgttatatcttttgagcttgacctttcatacaag
gaatgctgtgttgatggtgacacaagttcactttggcatattgctaaagctattcataaa
ttggagttttcctttggatttattccgaatgtgagggccaaaggaaaggcatcaacaaag
gttgctgaaattttgaatagcttacaagttgaagagccagtcagctcaacagatctggga
attcctgagataaatacactcattttacttgatagagaggttgatttggtgacacctatg
tgctttcagctaacatatgaaggacttctggatgagattttgcaaatcaataatggttca
gtggaggttgataccactgttatgggcagccagcaagatggaaaaaaggtcaaggttcct
ctgaattctagttgtctattcgtttttttcctttgtttccccagcgacaaattgttcaag
gaaattcgagatatgaactttgaagttgtggttcaggttttgcgccagaaggcaacttca
attcaacaagattatgcagaagttaaatctcaatcgcaatcagtatcggagctgaaggat
tttgttaagaaattaaactcattgcctgaaattgctagacacgtaaaccttgctcaacat
ctgcaatcttttacttctaaaccatctttccatgctcgactagacatagaacagacactt
cttgagctccagaattatgacatatgctttgagtacattgaggagatgattcataagcag
gaatcacttgccaacgtactgcggttgctggtgttattttcgattactaattctggcctt
ccaaagaagaactttgattacttgaggagagagattctgcatagctatggatttgagcac
atgcctacattatataatctggaaaaagcaggcctctttaagaaacaggaatccaaaagc
aactggctggctattgcacgagctttccaacttattgttgaggaaactgacacggccaac
cctaaagatatttcctacatattttctggatatgcaccacttagcattcgtcttgtacaa
catgcaattcgttctggatggcggtctatggaagaaatactgaagctgttaccaggacct
catgtggatctaaagaggggtgttcctaatagcaactctttgctagatgcaaatccagct
ttccaatctaattttgatagggtcactgatggacgtcggtcattagctttggtagtcttc
atcggtggaatatctttcgcagagattgctgctcttcgttttcttagttcacaggaagga
atggggtatgacttccttattgggactacaaaaataatcaacgggacaactttacttgaa
actctcatgggctacaaagattag
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