Zingiber officinale (ginger): 122016227
Help
Entry
122016227 CDS
T08725
Name
(RefSeq) tRNA dimethylallyltransferase 2-like isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00908
Zeatin biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00908 Zeatin biosynthesis
122016227
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
122016227
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122016227
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
122016227
Prenyltransferases [BR:
zof01006
]
Compound prenylation
tRNA dimethylallyltransferase
122016227
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
122016227
Prokaryotic type
122016227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
SF3a60_Prp9_C
AAA_25
IPT
nSTAND3
AAA_33
Zeta_toxin
AAA_22
RsgA_GTPase
zf-met
AAA_16
SLFN-g3_helicase
AAA_28
Motif
Other DBs
NCBI-GeneID:
122016227
NCBI-ProteinID:
XP_042429393
LinkDB
All DBs
Position
8B:complement(34327721..34332346)
Genome browser
AA seq
467 aa
AA seq
DB search
MADTNGAPLPPEEEAMVDSDEHIPFSGNRTDEGAKSKNKVVVVMGATGAGKSRLAIDLAS
HLSGVEIVNADSMQVYRGLDVLTNKVPVPERNGVPHHLLGCIDPSVGFTSRDFRDLAIPI
IDDVLLREGLPVVVGGTNYYIQALVSPFLADDLVEDVAACSRDEPRENCGIDKIASFERL
KEVDPVAANRIHPNDHRKIKRYLDLYESSGVRPSNLFQGKNAEKRGRADTSRYNCCFIWV
DVSLPILDRYVEQRVDSMLDSGLLNEVCGIYNQNTDYTQGLYQAIGVHEFGMFFKSYFSI
KESTEVPWPYFSEIGDMNGDVLKKLLAEAIEKLKSNTCKLVRRQKRRLNQLKSVFGWNFH
HVDATEAFTSNSGDLWQTTVVEPCAKIVRNFLEEPGSLTNNKKLGHFEQKGPVLRDLWTQ
YICEACGNQVLRGAHEWEQHKQGRRHRKRLFGLKKQFYITQQVRTVP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacgaacggagcccctttgccgccggaggaggaggcgatggtcgattccgac
gagcacatcccattctccggcaatcgcacagacgaaggtgcgaaaagcaagaacaaggtg
gtggttgtgatgggagcgactggggcagggaagtcgcgcctggccatcgatctcgcctca
cacttatccggcgtggagatcgtcaacgccgactctatgcaagtctaccgaggcctcgac
gtcctcactaacaaagttcccgtccctgaacgcaatggagttccgcatcatctgctaggt
tgtattgatccgtctgttggattcacttccagagatttccgtgatctggcgattccaatt
atagatgacgttctgttacgtgagggcctcccggttgtcgttgggggtacgaattactac
attcaggctcttgtgagcccattccttgcggatgatctagtggaagatgtggcagcatgc
tcacgggatgaacctcgagaaaactgtggaattgataaaattgctagctttgagcggctg
aaggaggttgatccagttgctgcgaacagaatccatccaaatgaccacagaaaaataaaa
cgttatttggacttgtatgaaagctctggtgtccggcctagtaatctttttcagggaaag
aatgctgagaagaggggacgtgctgatacttctagatataattgttgttttatatgggtg
gatgtttctctacctatactggatagatatgtggaacaaagagttgactccatgcttgat
tctggactgctgaatgaagtctgtggtatctacaatcaaaacacagattatacccaaggc
ttatatcaggctattggtgtccatgaatttgggatgttttttaaaagctacttctccatt
aaagagtcaactgaggtcccatggccatacttctcagagattggcgatatgaatggtgac
gtgctgaaaaagttgttagctgaagccatagagaagttaaaatccaacacatgcaaactt
gttcgccgccaaaaacgacggcttaatcaattgaagtcagtttttggatggaactttcac
catgttgatgcaacagaagcttttacctccaactcgggtgatctatggcagacgacagta
gttgaaccttgtgcaaaaattgtgagaaattttttggaggaaccgggttctttgaccaac
aataaaaagctgggtcatttcgagcaaaagggtccagttttaagggacttgtggacccaa
tatatatgtgaggcgtgtggcaatcaggttttgcgaggagcacatgaatgggagcaacat
aagcaaggtcgtaggcatagaaaaagattgtttggcctgaagaagcaattctatatcacc
caacaagttagaacggtgccttag
DBGET
integrated database retrieval system
