Zingiber officinale (ginger): 122016233
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Entry
122016233 CDS
T08725
Name
(RefSeq) nuclear pore complex protein NUP58-like
KO
K14307
nucleoporin p58/p45
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122016233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122016233
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122016233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP58_M
Motif
Other DBs
NCBI-GeneID:
122016233
NCBI-ProteinID:
XP_042429402
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Position
8B:385269..390757
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AA seq
534 aa
AA seq
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MAFPFRTPTPRPQRSRRSLSQTPRQQSPLFQNPQTQQQQVFQQSPFQFERPQTQLRRQEQ
ATRTASQKQLLLYTKDKMSAGYNTHWEDLHPVSQKLLLKIEVCILKHKNESQRLDQCSRL
YDSSVSGDSFEANSSRIIQELGLITTTMEREKVSIQDLRSSTNKLIWDTESAIRSYVMLR
SRFICQSVTTASNVASGNPNTELGLVSKQTNQLANSSTAPVFYFYIGIPKRPSIFMEQII
TKFEKYLSECYRWIEEVEQLVMMENGRRGSNALESLPQVMSNVHDFFIHVAAKVESLHQH
VESMKIAYLADQRCRGDANDPFLEANRRETAKREAASRKVHPTLYLSTVCSQPTRGAFNS
SVAPATNTMQPSIVPSAAFSGSGLSLFSTPSAPAASSGSGHSLFSTPSSAPAASSSFLIS
TPTASSPASNLFGSSGFSPHSTSFGTPPLLFGSIQASAGFATSTPAVGSTPAVGSSLFST
PLSAAGAATGPGVPLPPRSRLAGNQMANLQHATGPGVSVGLSKSSRPKSRTSRR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccctttccggactccgactccccgacctcagcggtcgcggcgttctctgtcc
caaactcctcgacagcaatcgcctctcttccaaaaccctcagactcaacagcagcaggtt
tttcagcagtcaccgttccagtttgagaggccgcagacgcagttgcggcgacaggagcag
gcaacgaggactgcctcgcagaagcaattgttgctttatacgaaggataaaatgtctgct
ggatataatacccactgggaggatctgcatcctgtctcgcaaaaacttctcctaaagatc
gaagtgtgcattctcaagcacaagaatgagagccagaggctggatcagtgcagtcgactt
tatgattcatcagtatcaggtgacagttttgaggccaattccagtagaatcattcaggaa
cttgggcttatcactaccacgatggaaagagaaaaagtttctattcaagatctaagatcc
tcgacaaacaaattaatttgggacacagaatctgctattcggtcttatgtgatgctaagg
tcaaggtttatttgccagagtgtcacaacagcttcaaatgttgcctctggaaatccaaat
actgaattgggattggtttccaagcaaaccaaccaactagctaattcctctactgcacca
gttttttatttttacattgggattcccaaaagaccatctatttttatggagcagataatc
accaaatttgagaagtatctgagtgagtgctaccgatggattgaagaagtagaacagcta
gtaatgatggaaaatggtagaagaggttcaaatgccctggaatctttgccacaagtcatg
tccaatgtccatgatttctttattcatgtagctgccaaggtggagagccttcaccagcat
gttgaatcaatgaagatagcatatcttgctgatcagcgatgtcgaggtgatgcaaatgat
ccgtttcttgaggccaacagaagagaaacggctaaacgagaagctgcttctagaaaagtt
cacccaacattgtatttatctacagtttgttcacaaccaactaggggtgctttcaacagt
tcagtggcgcctgcaacaaacactatgcagccatccattgtaccatcagcagcattttct
ggaagcgggctttcattatttagtactccttcagctcctgctgcatcttctggaagtgga
cattcattatttagtactccatcatcagctcctgctgcatcttcctctttcctcatttca
accccaacagcatcttctcctgcatcaaacttgtttggctcttctggtttttccccacac
tcgacatcatttggcactcctccacttctctttggttctattcaggcttccgcaggattt
gcaacaagcactccagcagttggatccactcctgctgtgggtagctcacttttctcgact
cctttatctgcagcaggcgctgcaactggtccgggcgttccactcccccctcgtagccgc
ctagccggtaaccagatggcaaatttgcagcatgcaactggtccaggtgttagcgttgga
ttatctaaatcatcgaggccaaaatcgcgcaccagtaggcgctag
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