Zingiber officinale (ginger): 122016357
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Entry
122016357 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A
KO
K03066
26S proteasome regulatory subunit T6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122016357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
122016357
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122016357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_lid_PRS2_C
nSTAND3
AAA_2
AAA_5
AAA_16
AAA_22
RuvB_N
PRS7_OB
TIP49
AAA_24
AAA_28
NPHP3_N
AAA_33
AAA_18
AAA_3
Mg_chelatase
PhoH
AAA_14
ATPase
Parvo_NS1
RNA_helicase
IstB_IS21
DUF815
AAA_17
AAA_7
AAA_19
ABC_tran
AAA_11
DUF5906
AAA_25
TsaE
OapC
Sigma54_activat
bpMoxR
HR1
Zeta_toxin
RsgA_GTPase
APG6_N
Motif
Other DBs
NCBI-GeneID:
122016357
NCBI-ProteinID:
XP_042429562
LinkDB
All DBs
Position
8B:complement(61389103..61392779)
Genome browser
AA seq
420 aa
AA seq
DB search
MASAAVEKKQPAEVEGEMCAPAARVRGVGGEGLRQYYVQHIHDLQLQIRQKANNLQRLEA
QRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITK
LTPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL
PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG
SRMVRELFVMAREHAPSIIFMDEIDSIGSTRMESGTGNGDSEVQRTMLELLNQLDGFEAS
NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKK
IAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgccgcggtggagaaaaagcaaccggcggaggtggagggcgagatgtgcgcg
ccagcagcgcgggtgagaggagtcggcggcgaggggttgcggcagtactacgtccagcac
atccatgatctccagctccagatcaggcagaaggcgaacaacctccagcgcctcgaggcc
caacggaacgatctcaactctcgcgtcagaatgctccgagaagagctgcagctgcttcag
gagcctggttcgtatgttggagaggtggtgaaagtgatggggaaatccaaggtcctagtc
aaggttcatccagaaggcaaatatgttgttgatattgataagagtattgatatcactaag
ttgacgccatcaaccagagtcgcacttcgcaatgacagttatgttcttcatcttatccta
cccagcaaagtggaccctctggtcaatctaatgaaagtggaaaaggttcctgattcaacc
tatgacatgattggtggtcttgaccagcaaatcaaagagattaaggaggttattgagctt
ccaatcaagcatccggaattgtttgaaagtcttggaattgctcaaccaaagggagtcctg
ctttatggcccacctggcacagggaaaactctgttggcgagggctgttgctcatcatacg
gattgcaccttcattagggtttctggttctgagttggttcagaaatacattggagaaggc
tctcgaatggttcgggaattgtttgttatggctagggaacatgctccatcaattatattc
atggatgaaatagacagtattggatctactagaatggagtccggtactggtaatggtgac
agtgaagtgcaacggacaatgctagagctgcttaaccagcttgatgggtttgaggcatca
aacaaaattaaggttctaatggccactaaccggatcgacatcctagaccaagcacttctc
aggcctggtaggattgacagaaaaatcgagttcccaaatcccaatgaagagtcccgcttt
gatatcctgaagattcattcaaggaagatgaacttgatgcgtggcatagatcttaaaaag
attgcggaaaagatgaatggagcatccggagcagaacttaaggcagtatgcacggaagct
gggatgtttgcgctcagagaacgaagagtccatgttacacaggaggactttgagatggca
gttgctaaagtcatgaagaaagagaccgagaagaacatgtccctccgaaaactgtggaag
tag
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integrated database retrieval system
