Zingiber officinale (ginger): 122016449
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Entry
122016449 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122016449
KO
K15507
21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122016449
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Other ribosome biogenesis factors
122016449
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-GeneID:
122016449
NCBI-ProteinID:
XP_042429687
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Position
1A:complement(5602145..5603991)
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AA seq
540 aa
AA seq
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MHQCQLAKASVIPFLSKISKPGSRHPMVSICFSEDFIRRIPGSRSVLDVRSFSCHFGSRG
SACGWQTRVFSSSSRPGSPEFGGNAKTTESLPWIRGSDGNKGGKRVQERAPAGTKRSSWA
EAAESFLARDEQGIARKDNTIDAEEEDLEAEPVDDPRWDKIKSRYKDIIGREPQFEKQKN
QHWSKNASWERKPIKGAEESSFNTTEVRRWNNQETAEVRLWNNQENWGRKTWKEATDSSV
PKMVGQSVYGVGPVLAALTAERREFYALYVQEGLDLSGNNKKKKDKKAVERILKIAEKVG
LKVVEASKHDLNMVVDNRPHQGLILDASPLEMVSIRELDPVMPEAGKSPLWLALDEVTDP
QNLGAIIRSAYFFGAEGVVLCAKNSAPLSGVVSKASAGSLELIELLSCKNMMQFLSSSAE
NGWRVLGGSVSSKAVSLSEVEVGVPTILVLGSEGSGLRPLVERSCTQLIRIPGSFPSDAH
HGTPEVDVEEKDQDCFGRDLKSFLAVESLNVSVAAGVLLYQLTGKNNHDVRTSELSNDLM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagtgccaactcgccaaggcctcggtgataccgttcctttccaagatatcaaaa
ccaggaagccgccacccaatggtatcaatttgtttctccgaagacttcattcgtagaata
cctggaagcagaagtgttctcgatgtcagaagtttttcatgccattttggatcacggggg
agcgcttgcggatggcaaactagggttttttccagtagctcgcggccgggatcacctgag
tttggtggaaatgcaaagacaaccgaatcactgccttggataaggggatctgatgggaat
aagggggggaagcgggtacaagagagggcgccggctggaacaaagcgctcttcttgggca
gaagcagcggagagctttcttgctagagatgagcaaggtattgctaggaaagataacacc
atcgatgcagaggaggaagacctagaggccgagcctgtcgacgacccaaggtgggataag
attaagagcaggtacaaagatatcatcggacgagagccccaatttgagaaacagaagaac
cagcactggagtaagaatgcgagttgggagagaaagcccattaaaggtgctgaagagtca
tcgttcaatactaccgaggttcgtcggtggaataatcaggagactgccgaggttcgccta
tggaataatcaggagaattggggcaggaagacatggaaagaggcgactgattcttctgtt
ccaaaaatggttggccagagtgtttatggtgttggcccagtcttggctgcattgacggct
gaaaggagggagttttatgctctctatgttcaggaaggattagacttgagtggaaacaac
aagaagaagaaggacaagaaagcagtggagagaatattgaagatagctgagaaggtaggc
ttgaaggttgtagaagcctcaaagcacgacctcaatatggttgtcgataacagacctcat
cagggtttgattctcgatgcttctcccttggagatggtgagcataagggagctggatcct
gtgatgccagaagccggaaaatctcctctctggcttgccctggatgaggtgacagaccca
cagaacttgggggccatcatcagatcagcttatttcttcggagcagaaggtgtggtccta
tgtgccaagaattcagctcctttaagcggtgtagtaagcaaagctagcgctggttccctc
gaactgatcgagcttttgtcttgtaagaacatgatgcagttcttgtcatcttcagctgag
aatggttggcgagttctcggaggatcagtctcttctaaagctgtatccttgagtgaggtt
gaagtgggagtgcctacaattcttgttttgggtagcgaaggcagcgggttaaggcccctg
gtcgagaggtcttgtactcagttaattagaatccctggaagttttccgtcagatgcacac
catggaacacctgaagtagatgtcgaggaaaaggatcaggattgctttgggagagatctc
aagtcatttcttgctgtcgagagcttgaacgttagtgtagcagccggagtgcttctatac
caattgactggaaagaataatcacgatgtgcgtacttcagagttaagtaatgatttaatg
tga
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