Zingiber officinale (ginger): 122016542
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Entry
122016542 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122016542 isoform X1
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122016542
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
122016542
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
Motif
Other DBs
NCBI-GeneID:
122016542
NCBI-ProteinID:
XP_042429809
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Position
8B:64526300..64530490
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AA seq
518 aa
AA seq
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MIGSNNLYSATGIEESTSPPSAAYSDTCMKNFCPSSVEVSDQIEDINNDISSPKSDKSCN
PEVLQSSIRRMNTTEDPVEMKSGKYFFYDSPLYEETGFWIPVSVPPMLENDHDEWSKGFG
SNGGYFPEEEFSWDQLSEDKEMTIWDVVYEMLLMARGKVSAVSSGDLLSRKMPCMSTELL
EETWKEMAKTLAEANYGHKMVILETEPPKWLPDSAAAACMLCNVRFHPIMCSRHHCRFCG
GIFCNDCSKGRSLLPRKFRVADPQRVCDVCGVRLESVQVYLMNQISHASQLPTHDLTDLS
TLRSWLNFPWGRTMEYEIYKAANILRTYTKVGSLKPEKSIPEAILKQAKGLAILTVVCVG
MVVTYKIGTGLVISRREDGSWSPPSAISSFGLGWGAQVGGELTDYIIVLRNKAAIKTFSS
HGHLSLGAGVSAAAGIVGRTAEADIRAGDGGYAACFTYSCSRGAFVGCALNSNMVGTRVS
ENSRFYGAPVKASNILLGSMPRPPAAAVLYRALYDLIP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatagggagcaacaatctctactctgcaacgggaattgaggaatcgacatctcccccg
tctgccgcctattcggatacatgcatgaagaatttctgtccttcgtcggtggaggtttct
gatcaaatagaggatatcaacaatgatatctcttcacctaagagcgataaatcttgcaat
ccagaagtgcttcaatcttctattcgcagaatgaacactactgaagatcctgtagaaatg
aaatcaggcaaatatttcttttatgattcgccgctttacgaggaaactggcttttggata
cctgtatctgtccctcccatgcttgaaaatgaccatgatgaatggagcaagggatttggt
tccaatggtggttactttccggaggaagaattcagttgggaccaattatcagaagataag
gagatgaccatatgggatgtggtttatgaaatgcttcttatggcacgaggcaaagtgagt
gctgttagttcgggcgaccttttgagtcgtaaaatgccttgcatgtcaacagagctctta
gaagaaacatggaaagaaatggctaagactctggcagaggctaactatgggcacaaaatg
gtgattttggaaactgagccaccaaagtggttgcctgatagtgctgctgcagcttgcatg
ttgtgcaatgtgcgctttcacccaataatgtgctcaaggcatcattgccggttttgtggt
ggcatattttgcaacgattgttccaaaggaagaagcttgcttcctagaaaattcagagtt
gcagacccacaacgagtctgtgacgtttgtggcgttcgattggaatcggttcaggtttac
ttgatgaatcaaatcagtcatgcctcgcaacttccaacccatgatttgactgacctcagc
accttgcgatcatggttgaactttccatggggtcgaactatggagtatgagatttacaaa
gcagcaaatatacttcgcacttacactaaggttggttctttgaagcctgagaagtccatc
cctgaagctattctgaaacaagcaaagggccttgcaatcctaactgttgtttgtgttggt
atggttgttacttataaaattgggactggtcttgttatctctagacgagaagatggctcc
tggtctccaccctctgccatctcttcatttggtttgggatggggagctcaggttggaggc
gagctaactgactatataattgtattgaggaacaaagctgccatcaaaacttttagtagc
catgggcatttatcacttggtgcaggagtgagtgcagctgctggcattgttggacggaca
gcagaggctgacatacgtgcaggtgatggtggttatgctgcttgttttacatacagctgc
agtagaggtgcgtttgtcggttgtgctctcaatagcaacatggtcggtactcgtgtgtct
gaaaactcccgtttctatggcgctccggtcaaggcatccaacatacttttgggctcgatg
ccgaggccaccagctgccgccgtcctctaccgtgctctttatgatcttattccttaa
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