KEGG   Zingiber officinale (ginger): 122016708
Entry
122016708         CDS       T08725                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-like
  KO
K08266  target of rapamycin complex subunit LST8
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:zof00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    122016708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122016708
Membrane trafficking [BR:zof04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    122016708
   mTORC2 complex
    122016708
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_DCAF4 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_HPS5 NBCH_WD40 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_IFT140_2nd Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Mala_s_1-like Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd CFAP43_N Beta-prop_RIG_1st Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 122016708
NCBI-ProteinID: XP_042430027
LinkDB
Position
8B:22842389..22847840
AA seq 316 aa
MSQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRL
FDVNTNSPHPVRSYESHTNNVMSVGFQCDGNWMYSGSEDGTVKIWDLRTATCQREYESRA
AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAA
NNHGTCYVWRLLKGTQTMTYFEPLHKLQAHNGYILKCLLSPEFCDPNRYLATAASDHTVK
IWNVDGFTLEKTLTGHQRWVWDCVFSVDGAYLITASSDTTARLWSMSTGEIIRVYQGHHK
GTICCALHDGAESPPT
NT seq 951 nt   +upstreamnt  +downstreamnt
atgagtcaaccttctgtcattcttgccacggcaagctatgatcatactatcagattctgg
gaggccaaaagtgggcgctgttatcgcaccattcaatacccagattctcaagtaaatagg
ctggagattacacctgacaaaagatacttagctgctgctggcaatccccacatccgtctt
ttcgatgttaacactaatagtccacatccagttagaagctatgaatcacatactaataac
gtcatgtcagtgggttttcaatgtgatggaaattggatgtattcagggtctgaagatggg
acagtgaagatatgggatttgagaactgcaacttgtcaacgagaatatgaaagccgtgca
gctgtaaatacagtcgttctacacccaaaccaaaaagaactaatatctggtgatcaaaat
ggtaacataagagtgtgggatctggctgcaaattcgtgcagctgcgagttagttccagag
gttgatacagctgtaaggtctttgaccgtgatgtgggatggaagcatggttgtcgctgca
aataatcatggaacatgttatgtctggcgcttactaaaaggaactcagacaatgacctac
tttgaaccactccataaattacaagcacacaatggatatatcttgaagtgtctgctttct
ccagaattttgtgatcccaatcggtatcttgctactgctgcatctgatcacactgtgaaa
atatggaacgtagatggttttaccttggagaagactttaacaggacatcagcgctgggtt
tgggattgcgttttctctgtcgatggtgcttatctgataacagcttcatctgatacgact
gcaagactttggtcgatgtccactggagaaatcatcagggtttaccaaggtcatcacaaa
ggcacaatctgctgtgctctccatgatggcgctgaatcaccgccgacctga

DBGET integrated database retrieval system