Zingiber officinale (ginger): 122016990
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Entry
122016990 CDS
T08725
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03250
Viral life cycle - HIV-1
zof03272
Virion - Hepatitis viruses
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122016990
03272 Virion - Hepatitis viruses
122016990
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122016990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122016990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122016990
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
122016990
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122016990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
122016990
NCBI-ProteinID:
XP_042430378
LinkDB
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Position
8B:44560164..44563755
Genome browser
AA seq
426 aa
AA seq
DB search
MTLFLSEEKTTEQGTSSRLSKSIGAAAMAPPSPVSESISQQVQQFLTNSLSQRGPPALPY
AEDGKGHIRQHLVALTEAFPSLRPRSASFTHNDGRSAHLLQAEGTMPISFRGAVYHLPVA
IWLLESYPRRPPAVYLTPTRDMLVKPGHSLVDPSGLVREDTVPYLSSWVFPASNLVDLVR
SLSSPFGIDPPLYTRPSHTPSSPTPSPSPSFSSPYSGGGGPARFPPPPSSQAHSSARPTD
DPSEVYRRNAISKILGSVHADMAALHRSREAEMEGLFSTQAELRRRQKVLAHGLREMIEE
KEGLEQQLQFVLMNSDLLEGWVRENQELCRRCHDGVDLDDVFEPVDGLSRQMTECTAADM
AIEDTIYALDKAVQEGTIAFDSYLRTVRTLSREQFFHRATAAKGRATLVHAQVTSMAARV
QQYVSH
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgactctcttcctctccgaggaaaagacgaccgagcaaggaacgagttcgcgcctctcc
aaatcgatcggcgcggcggcgatggctcctccttcgccggtttcggagtctatctctcag
caagtgcagcagttcctcacgaattccctgtcgcaacgggggccgccggcgttgccttac
gcggaggacgggaaggggcacatccgccagcacctggtggccctgacggaggccttccct
tccctccgcccgcgctccgcctcgttcacccacaacgacggccgctccgcccacctcctc
caggccgagggcacgatgccgatctccttccgcggtgccgtgtaccaccttcccgtcgcc
atctggctcctcgagtcctacccgcgccgcccccctgccgtctacctcacccccacgcgc
gacatgctcgtcaagcccgggcactctctcgtcgacccttccggccttgtacgcgaggac
accgtcccctacctcagctcttgggtcttccctgcctccaacctcgtcgatctggtccga
tccctctcctcccccttcggcatcgatccccctttgtacacacgtcccagtcacacgccc
tcttctcctaccccttcgccctctccttccttctcatccccatatagcggcggtggtgga
cctgctcgattccctcctcccccttcgtcgcaggctcactcgtcagctcgccccaccgat
gacccctctgaggtctaccgccgcaatgctatctccaagatcctggggtccgtccatgcg
gacatggccgccctgcaccgctctcgagaggccgagatggagggtctcttctcgacccag
gctgagctgcggcgacggcagaaggtgctcgctcatgggctccgtgaaatgatcgaggag
aaggagggcttggagcagcagctgcagttcgttctcatgaactcggacttgctcgagggg
tgggtcagagagaatcaggagctatgtcggcgttgccatgatggggtggacctggatgat
gtctttgagcctgttgatggcctgtcgaggcaaatgacggagtgcactgcggctgacatg
gcaatcgaggatacaatctatgctctggataaggctgttcaggaagggacaattgctttc
gattcatatctgaggactgtgaggacattgtcaagagagcagttttttcaccgagcaaca
gcagctaagggtcgtgctaccctggttcatgcccaggttacaagtatggctgcaagggtg
caacaatacgtttcccactga
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