Zingiber officinale (ginger): 122017050
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Entry
122017050 CDS
T08725
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122017050
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
Others
122017050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WDR55
BCAS3_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
CPSF_A
DUF7099
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Ge1_WD40
PEP5_VPS11_N
Beta-prop_IFT80_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
122017050
NCBI-ProteinID:
XP_042430454
LinkDB
All DBs
Position
8B:complement(34850834..34859734)
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AA seq
474 aa
AA seq
DB search
MAAFSNPPLSSPSSPSPSPSSVSRPLLRSSSDRAADSSSLLASPPIVDPHPSPPQSIDPG
EEHVEIANSLQESESYEGLPSPAALRSILDSAAPATSLPSPPPVLAVPPSSPPRVVTYDD
DDDAVPLSLLHLSFNQDHGCFTAGTNRGFRIYNCDPFREIFRRDFDGGGIGVVEMLFRCN
ILALVGGGPNPCFPPNKVMIWDDHQSQCIGELSFRSEVLSVRLRRDRIVVVLDQNIFVYN
FTDLKLVHQIETVPNPKGLCTVSQHQGSLVLVCPGGQKGQVRIEQYGARQTKFIMAHDSR
IACLALSQDGRLIATASSKGTLIRIFSSVDGELLQEVRRGADRAEIYSLAFSSDMHWLAV
SSDKGTVHVFSLKINLGLTVNDKPRPAPVPNASISNSHLSFIKGVLPKYFHSEWSVAQFR
LQENSQYVTAFGHQKNTVVILGIDGSFFRCQFDPVTGGEMMQLECFNFLNPESL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctgcattctccaatccgcctctctcttctccttcctccccctccccgtccccctct
tctgtatcccgtcctctgctacggtcgagttccgaccgcgctgctgattcttcgtctctg
cttgcctcacctcctatcgtggatcctcacccgtcgccaccccaatcgatcgatcccgga
gaagagcatgtcgaaatcgccaattccctgcaggagtctgaatcctacgagggtttgccc
tcccctgctgccttgcgttcgatcctcgactccgctgccccagccacttcgcttccttcg
ccgcctccggtcctcgctgtcccgccctcctccccgcctagggtagttacatacgacgac
gacgacgacgcagtgccgctgtcgcttctacacctatctttcaaccaggaccacggctgc
tttaccgccggcaccaataggggattccgaatctacaactgcgatccgtttcgtgagata
ttccgccgagattttgatggagggggtatcggcgtagttgagatgctgttccgatgcaac
attctggctctcgttggcggcgggccgaatccgtgcttcccgcccaataaggtgatgatc
tgggatgatcaccagagccagtgcattggggagctctcctttcggtcggaggtcctctct
gtccggctacggagggacaggatcgtcgtcgtgctcgaccaaaacatattcgtctacaat
tttactgaccttaagttggtgcatcagattgagacagtgccaaatcccaagggtctatgc
accgtttcacagcatcagggatcgctggtgctggtctgtcctggtggtcagaaggggcag
gtcaggattgaacaatatggggcgaggcagactaagttcattatggcacacgattcaagg
attgcttgtttggcactgtcacaggatgggcgattgattgcaactgcaagttccaagggc
actcttattaggatatttagctcagtggatggggagcttcttcaagaagtaagaagaggt
gctgatagagcagagatatatagtttggctttctcttctgatatgcactggctagcagtc
tctagcgacaagggaactgttcatgttttcagtctcaagattaatttaggattgacagta
aatgataaacctcgccccgcaccagttccaaatgcttcaatttcaaattcacatctttct
ttcatcaaaggagtattgccaaaatatttccactctgaatggtcggtggcccagttccgt
ttgcaagaaaattcacaatatgtaacagcatttggccaccaaaagaatactgttgttatt
cttggtatagacgggagtttctttcggtgccaattcgatcctgttacgggtggagagatg
atgcagttggaatgcttcaacttcctaaatccagaatctctctag
DBGET
integrated database retrieval system
