KEGG   Zingiber officinale (ginger): 122017050
Entry
122017050         CDS       T08725                                 
Name
(RefSeq) autophagy-related protein 18a-like
  KO
K22991  WD repeat-containing protein 45
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122017050
Membrane trafficking [BR:zof04131]
 Autophagy
  Other autophagy associated proteins
   Others
    122017050
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 BCAS3_WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40 Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd CFAP251_N Beta-prop_HPS5 Beta-prop_RSE1_2nd CPSF_A Beta-prop_VPS8 DUF7099 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Tricorn_2nd Ge1_WD40 Beta-prop_NOL10_N PEP5_VPS11_N Beta-prop_IFT80_2nd WD40_Gbeta
Other DBs
NCBI-GeneID: 122017050
NCBI-ProteinID: XP_042430454
LinkDB
Position
8B:complement(34850834..34859734)
AA seq 474 aa
MAAFSNPPLSSPSSPSPSPSSVSRPLLRSSSDRAADSSSLLASPPIVDPHPSPPQSIDPG
EEHVEIANSLQESESYEGLPSPAALRSILDSAAPATSLPSPPPVLAVPPSSPPRVVTYDD
DDDAVPLSLLHLSFNQDHGCFTAGTNRGFRIYNCDPFREIFRRDFDGGGIGVVEMLFRCN
ILALVGGGPNPCFPPNKVMIWDDHQSQCIGELSFRSEVLSVRLRRDRIVVVLDQNIFVYN
FTDLKLVHQIETVPNPKGLCTVSQHQGSLVLVCPGGQKGQVRIEQYGARQTKFIMAHDSR
IACLALSQDGRLIATASSKGTLIRIFSSVDGELLQEVRRGADRAEIYSLAFSSDMHWLAV
SSDKGTVHVFSLKINLGLTVNDKPRPAPVPNASISNSHLSFIKGVLPKYFHSEWSVAQFR
LQENSQYVTAFGHQKNTVVILGIDGSFFRCQFDPVTGGEMMQLECFNFLNPESL
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggctgcattctccaatccgcctctctcttctccttcctccccctccccgtccccctct
tctgtatcccgtcctctgctacggtcgagttccgaccgcgctgctgattcttcgtctctg
cttgcctcacctcctatcgtggatcctcacccgtcgccaccccaatcgatcgatcccgga
gaagagcatgtcgaaatcgccaattccctgcaggagtctgaatcctacgagggtttgccc
tcccctgctgccttgcgttcgatcctcgactccgctgccccagccacttcgcttccttcg
ccgcctccggtcctcgctgtcccgccctcctccccgcctagggtagttacatacgacgac
gacgacgacgcagtgccgctgtcgcttctacacctatctttcaaccaggaccacggctgc
tttaccgccggcaccaataggggattccgaatctacaactgcgatccgtttcgtgagata
ttccgccgagattttgatggagggggtatcggcgtagttgagatgctgttccgatgcaac
attctggctctcgttggcggcgggccgaatccgtgcttcccgcccaataaggtgatgatc
tgggatgatcaccagagccagtgcattggggagctctcctttcggtcggaggtcctctct
gtccggctacggagggacaggatcgtcgtcgtgctcgaccaaaacatattcgtctacaat
tttactgaccttaagttggtgcatcagattgagacagtgccaaatcccaagggtctatgc
accgtttcacagcatcagggatcgctggtgctggtctgtcctggtggtcagaaggggcag
gtcaggattgaacaatatggggcgaggcagactaagttcattatggcacacgattcaagg
attgcttgtttggcactgtcacaggatgggcgattgattgcaactgcaagttccaagggc
actcttattaggatatttagctcagtggatggggagcttcttcaagaagtaagaagaggt
gctgatagagcagagatatatagtttggctttctcttctgatatgcactggctagcagtc
tctagcgacaagggaactgttcatgttttcagtctcaagattaatttaggattgacagta
aatgataaacctcgccccgcaccagttccaaatgcttcaatttcaaattcacatctttct
ttcatcaaaggagtattgccaaaatatttccactctgaatggtcggtggcccagttccgt
ttgcaagaaaattcacaatatgtaacagcatttggccaccaaaagaatactgttgttatt
cttggtatagacgggagtttctttcggtgccaattcgatcctgttacgggtggagagatg
atgcagttggaatgcttcaacttcctaaatccagaatctctctag

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