Zingiber officinale (ginger): 122017087
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Entry
122017087 CDS
T08725
Name
(RefSeq) heat stress transcription factor A-5-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122017087
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
122017087
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
HAUS5
APG6_N
LegC3_N
CT398_CC
Tektin
DUF3450
TMF_TATA_bd
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
122017087
NCBI-ProteinID:
XP_042430516
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Position
1A:complement(8274596..8276454)
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AA seq
409 aa
AA seq
DB search
MEGGASGAGGGPAPFLLKTYEMVDDASTNGIVSWSSTNASFVVWNHTEFAARLLPTYFKH
NNFSSFIRQLNTYGFRKIDPERWEFSNDDFVKGQKHLLKNIHRRKPIHSHSHPSGGVFPD
AERTALEDEVEQLSREKSSLESSLFKVKEQQSGTEIQIEDLERRVMNMEQRQLKMVAFLQ
RAMKNPQLMESLTKMASATSIDVSAINRKRRLPSDGDYCRDCSDNSFCDDTGFMLDQDFC
EKLKLGLCSAVPADSDVVILNTQHFDHELPECPPQVSETLQLRDAGAPVSPSKNDLFARA
VDEDDVLLPCRLSLTLSMEIDADDLSSSTQRHNDLNTPVAGMQNMTADSAADDAEAVSCE
ANDASSAPSGGTNDVFWQQFLTERPGSNPIDGLNEERMPGLSKKDKEQL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggcgcttccggtgccggaggcgggcctgctccttttctgctgaagacgtat
gaaatggtcgacgacgcctccacaaacggcatcgtctcctggagctccaccaatgcgagc
ttcgtggtgtggaatcacacggagttcgccgcccgcctgctcccgacttacttcaagcac
aacaacttctctagcttcatccgacagctcaatacctatggcttcaggaagatcgacccg
gagcggtgggagttctcgaacgacgacttcgtcaaggggcaaaagcacctcttgaagaac
atccaccggcgcaagcccatccacagccatagccatccatcgggaggtgtttttcctgac
gcggagaggacggcgctggaagatgaggtcgagcagcttagcagggagaagtcgagcctc
gagtctagtttattcaaagtcaaggagcaacaatccgggacggagatccagattgaggat
ctggaacgcagggtgatgaacatggagcagaggcagctcaaaatggttgctttcctgcaa
cgtgccatgaaaaaccctcagctcatggaaagtctaacgaagatggcctcagccacatca
atagatgtctcagccattaacaggaagcggagattgccgtcggatggggattactgccga
gattgttccgacaacagcttctgcgatgataccgggttcatgctcgatcaagatttctgt
gagaagctaaaattaggtctgtgctcagctgttccggccgattctgatgtggtgatcctc
aatacgcagcactttgatcatgagctgccggagtgcccccctcaggtgtctgagacacta
cagctccgtgatgccggggctcctgtttctccatcaaagaatgatttgtttgctagagct
gttgacgaagacgatgtgcttcttccatgccgtttgagtttaacgctttcaatggaaatc
gatgccgacgatctctcatcttctactcaaagacataatgatcttaatacgccagttgca
ggcatgcaaaacatgactgctgattctgctgctgatgatgctgaagctgtgtcctgtgaa
gcaaacgatgcatcctcggccccttcaggtggaacaaacgatgtattctggcaacaattc
ttaactgaaaggccaggttcgaatcccattgatgggctgaatgaagagaggatgccagga
ttaagcaaaaaagataaggagcaactgtaa
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