Zingiber officinale (ginger): 122017110
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Entry
122017110 CDS
T08725
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122017110
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122017110
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122017110
NCBI-ProteinID:
XP_042430550
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Position
8B:complement(17653852..17655499)
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AA seq
438 aa
AA seq
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MAKSLRSFLSLVLLLGIFVVSDGSFGNKASNSRSSGDLSRSLRTAQTMNSTSASAAVDDP
EEVAATVCMSIRNSTNRRSLGYLSTCGTGNPIDDCWRCDHNWHLDRKRLADCGIGFGRNA
AGGRAGDYYVVTDPRDEDPVNPRPGTLRHAAIQDAPLWITFQRDMVIVLKQELIVNSFKT
IDGRGADVHISGGACVTVQYVTNVIIHGIHIHDCRPTGNAMVRSSPSHYGWRTMADGDGI
SIFGSSHVWVDHCSLSHCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDSYDGDKAM
QVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPAN
PFAKEVTKRVDTDASEWRRWNWRSAGDLLLNGAYFTASGAGASASYARASSLGAKPSAMV
ASLTSGAGALSCRKGRLC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagtttgagatcgttcctttctctggtgttacttcttggaatctttgttgtt
tcggatggaagttttgggaacaaggcttccaattcgaggagtagcggagatctaagcagg
agtttgaggacggcgcagacgatgaactcgacgagcgcttccgctgcagtcgatgacccg
gaggaggttgccgccaccgtctgcatgagcataaggaacagcacgaatcggagatctctg
ggttatctgtcgacatgcggaaccgggaaccccatcgacgattgctggcgctgcgatcac
aactggcatctcgaccgcaagcgcctagccgactgcggcattggcttcggccgcaacgcc
gccggaggccgggccggcgactactacgtcgtgacggacccgcgcgacgaagacccagtg
aacccgcgcccgggcacgctccgccacgccgccattcaggacgcgccgctgtggataacg
ttccagcgcgacatggtcatcgtgctcaagcaggagctcatcgtgaacagcttcaagacc
atcgacgggcgcggcgccgacgtgcacatctccggcggagcctgcgtcaccgtccagtac
gtcaccaacgtcatcatccacggcatccacatccacgactgcaggcccaccggcaacgct
atggtccgcagctccccgtcgcactacgggtggcgcaccatggccgacggtgacggcatc
tccatcttcggctcgagccacgtctgggtcgaccattgctccctctcccactgcgccgac
gggctcgtcgacgccgtcatgggctccacggccatcaccatctccaacaactacttcacc
caccacaacgaggtcatgctcttggggcacagtgattcctacgacggggacaaagccatg
caagtgacgatcgcgtttaaccatttcggggagggactgatacagaggatgccgaggtgc
aggcatggctacttccacgtggtgaacaacgactacactcactgggagatgtatgccatc
ggcggaagcgctaacccgacgatcaacagccagggaaatcggtacctggctccggcgaat
ccgttcgcgaaggaggtgacgaagagggtggacacggatgccagtgaatggaggaggtgg
aattggaggtcggcgggggacttgctgttgaatggcgcttacttcacggcgtcgggggca
ggggcgtcggctagctacgccagggcttccagtctcggggccaagccgtcggctatggtg
gcctcgttgacttccggcgccggagcgctttcttgcagaaagggtagactctgttaa
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