Zingiber officinale (ginger): 122017111
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Entry
122017111 CDS
T08725
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
zof04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122017111
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122017111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122017111
04131 Membrane trafficking [BR:
zof04131
]
122017111
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
zof04091
]
122017111
Chaperones and folding catalysts [BR:
zof03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
122017111
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
122017111
Autophagy
ER-phagy
Other ER-phagy associated proteins
122017111
Lectins [BR:
zof04091
]
L-type lectins
122017111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF4834
DUF6479
Motif
Other DBs
NCBI-GeneID:
122017111
NCBI-ProteinID:
XP_042430551
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All DBs
Position
8B:complement(21602254..21606894)
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AA seq
544 aa
AA seq
DB search
MGGRNLTAPLVLMFIAALFSQIWASDPLFYESFDESFEGRWIVSEKADYEGTWKHSKSDG
HEDYGLLVSEQARKYAIVKELEEPVALKDGTVVLQFEVRLQNGLECGGAYLKYLRPQEAG
WTPKGFNNESPFTIMFGPDKCGSTNKVHFILQHKNPKTGKFVEHHLKYPPSVPFDKNSHV
YTAILKPDNELKILIDGEEKKKANLLSSDDFEPALIPPKTIPDPDDKKPEDWDERAKIPD
PDAVKPDDWDEDAPMEIEDEEAVKPEGWLDDEPAETDDPEATKPEDWDDEEDGEWEAPKV
DNPKCEAAPGCGEWKRPMKRNPAYKGKWSAPLIDNPNYKGIWKPQEIDNPEYFELDKPNM
EPIDAIGIEIWTMQDGILFDNILISTDEKVAESYRLETWKPKYDVEKEKQKAEDAGAGFK
DGLSGLQKKIFDVLYRIADIPFLKPYQIKIIDVIEKAEKQPTVTIGVLVSTVVVFATVIV
RLLFGSKKKPQRQEVSAPSASKTKSAETVGNDSPGTNGTNEEKEENVKVDDASAPRARKS
RRET
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggaggaacttgacggcaccgcttgtcttgatgtttattgcggcccttttctcc
cagatttgggcgtcggatccgttgttctacgagtcgttcgacgagtctttcgaggggcga
tggattgtctccgagaaggcggactacgaaggtacatggaaacactcgaagagtgatggt
catgaagactatgggcttcttgtcagtgaacaagctagaaaatatgcgattgtcaaggaa
cttgaggagccagttgctctcaaggatggaacagttgttcttcagtttgaagtccggtta
caaaatggacttgaatgtggaggcgcatatcttaagtacctacgtccacaagaagctgga
tggactcctaagggatttaataatgagtctccatttactatcatgtttggacctgataag
tgtgggtccacaaataaggtgcacttcatccttcagcacaagaatcctaaaactggaaag
tttgtggaacaccatttgaagtatcctccatcagtgccatttgacaaaaattctcatgtt
tatactgctattctgaaacctgacaatgagctgaaaattttgattgacggtgaagagaag
aaaaaggcgaatttgttgtcttctgatgactttgagccagctcttatcccacccaaaaca
attcctgaccctgatgacaagaaacctgaggattgggatgagcgagctaaaattccagac
cctgatgcagtaaagcctgatgactgggatgaagatgcgccaatggagattgaagatgag
gaagctgtcaaaccagaaggatggctggatgatgaacctgcggaaactgatgaccctgaa
gcaacaaagccagaagattgggatgatgaagaggatggagaatgggaagcacccaaggtt
gacaaccccaagtgtgaagcagcacccggctgtggagagtggaagaggcccatgaagagg
aatccagcatacaaggggaaatggtctgctcctctaattgacaatccgaactacaagggt
atctggaagccacaagagatagataatcccgaatacttcgaactggacaaaccgaacatg
gagcctattgatgccattggtattgagatatggaccatgcaggatgggattctgtttgac
aatattttgatatctactgacgagaaggttgctgagtcgtataggttggagacatggaag
cctaagtatgacgttgagaaagaaaagcagaaggctgaagacgctggtgctgggtttaaa
gatggactttcaggtctccagaagaagatatttgatgttctctacaggatagcagacatt
cctttcttgaaaccataccagataaaaatcattgatgttattgagaaggcagagaaacaa
cctaccgtcaccattggagttctggtgtccacggtagtggtatttgccactgtcatagtc
aggcttctctttggtagcaaaaagaaacctcagagacaagaagtctcagcaccgtctgct
tccaaaaccaagtcagccgaaactgttgggaatgattctccaggcactaatggcactaat
gaagagaaagaagagaatgtaaaagttgatgatgcatctgctcctcgagctcggaaatcc
agaagggagacctga
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