Zingiber officinale (ginger): 122017232
Help
Entry
122017232 CDS
T08725
Name
(RefSeq) protein GLE1-like isoform X1
KO
K18723
nucleoporin GLE1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122017232
03015 mRNA surveillance pathway
122017232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122017232
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122017232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
122017232
NCBI-ProteinID:
XP_042430731
LinkDB
All DBs
Position
1A:complement(8562598..8580592)
Genome browser
AA seq
628 aa
AA seq
DB search
MKWDPVKGSAINPTHSDYIQLEPPCSKSSLVVASVDPDQQWTMDDFVAGLQALELKLGFS
SSKIPSPLKQLERVLLQESEMHMLDKTRCESDQVAGWRMTCPDFDSSDFEGSVDDLSFET
TKSYAMDKQNLEKSIFLELERQSQLRLKEELRSKLADLVASQRSEINRSASAMTQISKYV
EVKQEMDRKLDRQYQRKIAEMLDSHLSAVQRDHEQRSLIEERRLRDDAAFEEAKKRALIE
EKHRREKVKAEAEAKLKAAKLAEEAERTTMEAAQRAAKESAETETVSIREAAASEDARKK
STDDDNTNTKDTTSLPKMPKEPLLTDGIKVLATDAALKAEIKRLKIYNEVIENPNLPSQK
ELDRRGRQISKILKQLTGTVENVRTKKDALVNILSTDIPGCPSSISATMFAKQVIAWCED
STGTFDSTVFACGRVILLVTSKIPDVMDFLVAEFHKVCIYTVPKYLQPSDQASQNDDYWK
MIGYHEKDGKIESSESYLNRVQSYMKLYAAIIQTQIEGIRNPHGLGKGWSWLARFLNALP
ANKSTAYALEAFLKMAGFALYRKYKYQFKKMLDVISRSYLPAVRLKEKGDRKIVEVVKKL
EQYLEHEMFRKEPDGWRLHDGLLSKELV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgggatcctgtgaagggttctgccatcaaccctacccactcggattacattcag
cttgagccaccatgcagcaagagctctcttgtggttgcttcagttgatcctgatcaacaa
tggacgatggatgattttgtagcagggctccaagcattagagctgaagcttggattttca
tcttctaagataccatcacctctaaagcagcttgaaagagtattactgcaagaaagtgaa
atgcacatgttggataagacgaggtgtgaaagtgaccaggtagctgggtggaggatgact
tgtcctgattttgattcaagtgactttgaaggatctgtcgatgatttgtcatttgaaaca
actaaatcttatgccatggacaaacaaaaccttgaaaaaagcatctttttggagcttgaa
cggcagagtcagctaagacttaaggaggaacttaggtccaagttagcagacttggttgca
tctcagagaagtgaaatcaacagatcagcttctgccatgacccagatttcaaaatatgta
gaagtaaaacaggagatggatagaaagctcgacagacaatatcaaagaaaaattgctgaa
atgcttgatagtcacttgtctgctgttcaaagggatcacgaacaaagatccctaattgaa
gaaaggagattaagggatgatgctgcttttgaagaagccaaaaaaagggcccttattgaa
gaaaaacatcgccgagaaaaagttaaagcagaagctgaggcaaaactgaaggctgcaaaa
ctggctgaagaagcagaaaggacaactatggaggctgcacaaagagcagccaaagaatct
gctgaaacagaaactgtcagtattagggaagctgctgcttctgaagatgcaagaaagaaa
tctacggacgatgataatacaaatacaaaggatacaacttcacttccaaaaatgccaaaa
gagccactgctgacagatgggatcaaggttttggcaactgatgctgcactgaaagcagaa
atcaaaagactaaaaatttataatgaagtgattgagaaccctaatcttccttctcagaag
gaacttgatagacgtgggaggcagatctctaaaatcctaaagcaattaactggaactgta
gagaatgtcagaacaaaaaaagatgcacttgttaacattctctcgacggatattccaggc
tgtcccagctccatttctgcaactatgtttgcaaaacaggtgattgcatggtgcgaagac
tcaactggaacttttgacagcactgtttttgcatgtgggcgtgtcattcttttagttaca
tcaaagattccagatgtgatggattttctggtggctgagtttcataaagtttgcatctat
accgttccaaaatatttgcaaccatcagatcaagcatcacagaacgatgactactggaag
atgattggttaccatgaaaaagatggaaaaattgaaagctccgagagttacctgaaccgt
gtccaatcttatatgaagctttatgctgccataattcagacacagattgagggtatcaga
aatcctcatggcttagggaaaggatggtcgtggcttgcgaggtttctgaatgccttgccc
gcaaacaaatccacagcttatgctttggaagctttcttgaagatggcaggctttgctttg
tacaggaaatacaaatatcaattcaagaagatgcttgatgttatttctcgaagctatttg
cctgcggtcagactcaaggaaaaaggagataggaagattgttgaagtcgtcaaaaaacta
gaacaatatttagaacatgaaatgtttagaaaggaacctgatggatggcgtctccatgat
ggcttgttgtcaaaggagttggtgtaa
DBGET
integrated database retrieval system
